Protein–RNA interactions for Protein: A8MV65

VGLL3, Transcription cofactor vestigial-like protein 3, humanhuman

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL3A8MV65 ZNF778-202ENST00000433976 3608 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
VGLL3A8MV65 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
VGLL3A8MV65 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
VGLL3A8MV65 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC16.76■□□□□ 0.27
VGLL3A8MV65 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC16.76■□□□□ 0.27
VGLL3A8MV65 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
VGLL3A8MV65 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
VGLL3A8MV65 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
VGLL3A8MV65 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
VGLL3A8MV65 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
VGLL3A8MV65 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC16.76■□□□□ 0.27
VGLL3A8MV65 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
VGLL3A8MV65 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC16.76■□□□□ 0.27
VGLL3A8MV65 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
VGLL3A8MV65 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
VGLL3A8MV65 HLA-L-209ENST00000420110 1011 ntBASIC16.76■□□□□ 0.27
VGLL3A8MV65 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC16.76■□□□□ 0.27
VGLL3A8MV65 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC16.76■□□□□ 0.27
VGLL3A8MV65 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC16.76■□□□□ 0.27
VGLL3A8MV65 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
VGLL3A8MV65 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC16.76■□□□□ 0.27
VGLL3A8MV65 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
VGLL3A8MV65 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
VGLL3A8MV65 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
VGLL3A8MV65 SMTN-203ENST00000358743 3198 ntAPPRIS P4 TSL 2 BASIC16.76■□□□□ 0.27
VGLL3A8MV65 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
VGLL3A8MV65 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
VGLL3A8MV65 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
VGLL3A8MV65 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC16.76■□□□□ 0.27
VGLL3A8MV65 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
VGLL3A8MV65 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
VGLL3A8MV65 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
VGLL3A8MV65 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC16.76■□□□□ 0.27
VGLL3A8MV65 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
VGLL3A8MV65 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
VGLL3A8MV65 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC16.75■□□□□ 0.27
VGLL3A8MV65 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
VGLL3A8MV65 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
VGLL3A8MV65 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
VGLL3A8MV65 AC078925.2-201ENST00000624013 1973 ntBASIC16.75■□□□□ 0.27
VGLL3A8MV65 AC097637.2-201ENST00000624096 1997 ntBASIC16.75■□□□□ 0.27
VGLL3A8MV65 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
VGLL3A8MV65 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC16.75■□□□□ 0.27
VGLL3A8MV65 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
VGLL3A8MV65 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
VGLL3A8MV65 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
VGLL3A8MV65 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC16.75■□□□□ 0.27
VGLL3A8MV65 CYP2T1P-201ENST00000432607 1285 ntBASIC16.75■□□□□ 0.27
VGLL3A8MV65 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
VGLL3A8MV65 AC083906.2-201ENST00000511578 360 ntBASIC16.75■□□□□ 0.27
VGLL3A8MV65 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
VGLL3A8MV65 PLLP-204ENST00000569059 665 ntTSL 3 BASIC16.75■□□□□ 0.27
VGLL3A8MV65 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
VGLL3A8MV65 AC104771.1-201ENST00000603335 964 ntBASIC16.75■□□□□ 0.27
VGLL3A8MV65 AC069236.1-201ENST00000604339 616 ntBASIC16.75■□□□□ 0.27
VGLL3A8MV65 OR10C1-204ENST00000622521 1039 ntBASIC16.75■□□□□ 0.27
VGLL3A8MV65 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
VGLL3A8MV65 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
VGLL3A8MV65 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
VGLL3A8MV65 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
VGLL3A8MV65 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC16.75■□□□□ 0.27
VGLL3A8MV65 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
VGLL3A8MV65 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
VGLL3A8MV65 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
VGLL3A8MV65 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
VGLL3A8MV65 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
VGLL3A8MV65 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC16.75■□□□□ 0.27
VGLL3A8MV65 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
VGLL3A8MV65 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
VGLL3A8MV65 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
VGLL3A8MV65 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
VGLL3A8MV65 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC16.75■□□□□ 0.27
VGLL3A8MV65 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
VGLL3A8MV65 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
VGLL3A8MV65 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
VGLL3A8MV65 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
VGLL3A8MV65 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
VGLL3A8MV65 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
VGLL3A8MV65 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
VGLL3A8MV65 ADD2-202ENST00000355733 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
VGLL3A8MV65 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
VGLL3A8MV65 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
VGLL3A8MV65 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC16.74■□□□□ 0.27
VGLL3A8MV65 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC16.74■□□□□ 0.27
VGLL3A8MV65 ING5-213ENST00000636051 4199 ntTSL 5 BASIC16.74■□□□□ 0.27
VGLL3A8MV65 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
VGLL3A8MV65 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
VGLL3A8MV65 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
VGLL3A8MV65 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
VGLL3A8MV65 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
VGLL3A8MV65 PBX1-209ENST00000485769 834 ntTSL 2 BASIC16.74■□□□□ 0.27
VGLL3A8MV65 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
VGLL3A8MV65 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC16.74■□□□□ 0.27
VGLL3A8MV65 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
VGLL3A8MV65 SFI1-229ENST00000540643 4226 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
VGLL3A8MV65 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
VGLL3A8MV65 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
VGLL3A8MV65 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
VGLL3A8MV65 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
VGLL3A8MV65 TRPM4-201ENST00000252826 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms