Protein–RNA interactions for Protein: A6NHT5

HMX3, Homeobox protein HMX3, humanhuman

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMX3A6NHT5 AC116562.2-201ENST00000507042 360 ntBASIC14.85□□□□□ -0.03
HMX3A6NHT5 AC097488.1-201ENST00000507834 756 ntBASIC14.85□□□□□ -0.03
HMX3A6NHT5 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC14.85□□□□□ -0.03
HMX3A6NHT5 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC14.85□□□□□ -0.03
HMX3A6NHT5 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC14.85□□□□□ -0.03
HMX3A6NHT5 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC14.85□□□□□ -0.03
HMX3A6NHT5 USP36-216ENST00000589424 970 ntTSL 5 BASIC14.85□□□□□ -0.03
HMX3A6NHT5 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC14.85□□□□□ -0.03
HMX3A6NHT5 DECR2-212ENST00000627716 352 ntTSL 2 BASIC14.85□□□□□ -0.03
HMX3A6NHT5 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
HMX3A6NHT5 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
HMX3A6NHT5 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC14.85□□□□□ -0.03
HMX3A6NHT5 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC14.85□□□□□ -0.03
HMX3A6NHT5 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC14.85□□□□□ -0.03
HMX3A6NHT5 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC14.85□□□□□ -0.03
HMX3A6NHT5 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
HMX3A6NHT5 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HMX3A6NHT5 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
HMX3A6NHT5 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
HMX3A6NHT5 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
HMX3A6NHT5 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
HMX3A6NHT5 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HMX3A6NHT5 AC022898.2-201ENST00000616822 1312 ntBASIC14.85□□□□□ -0.03
HMX3A6NHT5 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
HMX3A6NHT5 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC14.85□□□□□ -0.03
HMX3A6NHT5 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HMX3A6NHT5 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HMX3A6NHT5 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HMX3A6NHT5 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
HMX3A6NHT5 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
HMX3A6NHT5 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
HMX3A6NHT5 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HMX3A6NHT5 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
HMX3A6NHT5 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC14.84□□□□□ -0.03
HMX3A6NHT5 NID2-208ENST00000617139 3827 ntTSL 5 BASIC14.84□□□□□ -0.03
HMX3A6NHT5 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
HMX3A6NHT5 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HMX3A6NHT5 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HMX3A6NHT5 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HMX3A6NHT5 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HMX3A6NHT5 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
HMX3A6NHT5 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HMX3A6NHT5 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC14.84□□□□□ -0.03
HMX3A6NHT5 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC14.84□□□□□ -0.03
HMX3A6NHT5 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
HMX3A6NHT5 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC14.84□□□□□ -0.03
HMX3A6NHT5 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HMX3A6NHT5 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
HMX3A6NHT5 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
HMX3A6NHT5 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC14.84□□□□□ -0.03
HMX3A6NHT5 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC14.84□□□□□ -0.03
HMX3A6NHT5 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC14.84□□□□□ -0.03
HMX3A6NHT5 AC116407.2-201ENST00000613639 860 ntBASIC14.84□□□□□ -0.03
HMX3A6NHT5 REXO1L10P-201ENST00000615707 1290 ntBASIC14.84□□□□□ -0.03
HMX3A6NHT5 REXO1L12P-201ENST00000622156 912 ntBASIC14.84□□□□□ -0.03
HMX3A6NHT5 CICP4-201ENST00000447359 2812 ntBASIC14.84□□□□□ -0.03
HMX3A6NHT5 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HMX3A6NHT5 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
HMX3A6NHT5 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC14.84□□□□□ -0.03
HMX3A6NHT5 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
HMX3A6NHT5 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
HMX3A6NHT5 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
HMX3A6NHT5 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
HMX3A6NHT5 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC14.84□□□□□ -0.03
HMX3A6NHT5 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
HMX3A6NHT5 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HMX3A6NHT5 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
HMX3A6NHT5 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HMX3A6NHT5 TBC1D3P2-202ENST00000577902 1649 ntBASIC14.84□□□□□ -0.03
HMX3A6NHT5 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HMX3A6NHT5 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
HMX3A6NHT5 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
HMX3A6NHT5 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC14.84□□□□□ -0.03
HMX3A6NHT5 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HMX3A6NHT5 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HMX3A6NHT5 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
HMX3A6NHT5 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC14.83□□□□□ -0.03
HMX3A6NHT5 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC14.83□□□□□ -0.03
HMX3A6NHT5 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
HMX3A6NHT5 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
HMX3A6NHT5 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
HMX3A6NHT5 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
HMX3A6NHT5 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
HMX3A6NHT5 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC14.83□□□□□ -0.03
HMX3A6NHT5 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
HMX3A6NHT5 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
HMX3A6NHT5 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
HMX3A6NHT5 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC14.83□□□□□ -0.03
HMX3A6NHT5 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
HMX3A6NHT5 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC14.83□□□□□ -0.04
HMX3A6NHT5 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
HMX3A6NHT5 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
HMX3A6NHT5 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC14.83□□□□□ -0.04
HMX3A6NHT5 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
HMX3A6NHT5 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC14.83□□□□□ -0.04
HMX3A6NHT5 BAALC-201ENST00000297574 801 ntTSL 3 BASIC14.83□□□□□ -0.04
HMX3A6NHT5 MDFI-202ENST00000373050 809 ntTSL 2 BASIC14.83□□□□□ -0.04
HMX3A6NHT5 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC14.83□□□□□ -0.04
HMX3A6NHT5 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC14.83□□□□□ -0.04
HMX3A6NHT5 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC14.83□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms