Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 VILL-207ENST00000465644 1857 ntTSL 5 BASIC16.19■□□□□ 0.18
AP4S1Q9Y587 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
AP4S1Q9Y587 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
AP4S1Q9Y587 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
AP4S1Q9Y587 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC16.19■□□□□ 0.18
AP4S1Q9Y587 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC16.19■□□□□ 0.18
AP4S1Q9Y587 AP002490.2-201ENST00000524791 560 ntBASIC16.19■□□□□ 0.18
AP4S1Q9Y587 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC16.19■□□□□ 0.18
AP4S1Q9Y587 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC16.19■□□□□ 0.18
AP4S1Q9Y587 TK1-205ENST00000590862 642 ntTSL 3 BASIC16.19■□□□□ 0.18
AP4S1Q9Y587 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
AP4S1Q9Y587 AL157888.1-201ENST00000631930 593 ntBASIC16.19■□□□□ 0.18
AP4S1Q9Y587 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
AP4S1Q9Y587 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC16.19■□□□□ 0.18
AP4S1Q9Y587 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
AP4S1Q9Y587 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
AP4S1Q9Y587 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC16.19■□□□□ 0.18
AP4S1Q9Y587 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
AP4S1Q9Y587 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
AP4S1Q9Y587 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC16.19■□□□□ 0.18
AP4S1Q9Y587 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
AP4S1Q9Y587 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
AP4S1Q9Y587 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
AP4S1Q9Y587 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC16.19■□□□□ 0.18
AP4S1Q9Y587 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
AP4S1Q9Y587 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
AP4S1Q9Y587 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
AP4S1Q9Y587 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
AP4S1Q9Y587 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
AP4S1Q9Y587 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
AP4S1Q9Y587 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
AP4S1Q9Y587 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC16.18■□□□□ 0.18
AP4S1Q9Y587 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
AP4S1Q9Y587 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC16.18■□□□□ 0.18
AP4S1Q9Y587 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
AP4S1Q9Y587 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
AP4S1Q9Y587 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
AP4S1Q9Y587 BLK-205ENST00000529894 2017 ntTSL 5 BASIC16.18■□□□□ 0.18
AP4S1Q9Y587 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
AP4S1Q9Y587 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
AP4S1Q9Y587 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
AP4S1Q9Y587 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
AP4S1Q9Y587 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC16.18■□□□□ 0.18
AP4S1Q9Y587 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
AP4S1Q9Y587 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
AP4S1Q9Y587 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
AP4S1Q9Y587 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC16.18■□□□□ 0.18
AP4S1Q9Y587 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC16.18■□□□□ 0.18
AP4S1Q9Y587 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
AP4S1Q9Y587 TSPY12P-201ENST00000421279 868 ntBASIC16.18■□□□□ 0.18
AP4S1Q9Y587 AC096633.1-201ENST00000422446 749 ntBASIC16.18■□□□□ 0.18
AP4S1Q9Y587 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC16.18■□□□□ 0.18
AP4S1Q9Y587 AC010653.2-201ENST00000623505 997 ntBASIC16.18■□□□□ 0.18
AP4S1Q9Y587 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
AP4S1Q9Y587 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC16.18■□□□□ 0.18
AP4S1Q9Y587 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
AP4S1Q9Y587 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
AP4S1Q9Y587 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
AP4S1Q9Y587 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
AP4S1Q9Y587 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
AP4S1Q9Y587 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC16.18■□□□□ 0.18
AP4S1Q9Y587 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC16.18■□□□□ 0.18
AP4S1Q9Y587 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
AP4S1Q9Y587 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
AP4S1Q9Y587 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC16.18■□□□□ 0.18
AP4S1Q9Y587 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
AP4S1Q9Y587 AL645728.1-201ENST00000366221 2101 ntBASIC16.18■□□□□ 0.18
AP4S1Q9Y587 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
AP4S1Q9Y587 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
AP4S1Q9Y587 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
AP4S1Q9Y587 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC16.18■□□□□ 0.18
AP4S1Q9Y587 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC16.18■□□□□ 0.18
AP4S1Q9Y587 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC16.18■□□□□ 0.18
AP4S1Q9Y587 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
AP4S1Q9Y587 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC16.17■□□□□ 0.18
AP4S1Q9Y587 AC006538.1-201ENST00000567905 1585 ntBASIC16.17■□□□□ 0.18
AP4S1Q9Y587 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
AP4S1Q9Y587 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
AP4S1Q9Y587 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
AP4S1Q9Y587 AC126177.1-201ENST00000547829 2218 ntBASIC16.17■□□□□ 0.18
AP4S1Q9Y587 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC16.17■□□□□ 0.18
AP4S1Q9Y587 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
AP4S1Q9Y587 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
AP4S1Q9Y587 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
AP4S1Q9Y587 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
AP4S1Q9Y587 AC009947.2-201ENST00000444014 672 ntBASIC16.17■□□□□ 0.18
AP4S1Q9Y587 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC16.17■□□□□ 0.18
AP4S1Q9Y587 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
AP4S1Q9Y587 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
AP4S1Q9Y587 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC16.17■□□□□ 0.18
AP4S1Q9Y587 USF2-205ENST00000594064 1179 ntTSL 2 BASIC16.17■□□□□ 0.18
AP4S1Q9Y587 SPIB-206ENST00000596074 847 ntTSL 2 BASIC16.17■□□□□ 0.18
AP4S1Q9Y587 FAM197Y4-202ENST00000622692 608 ntBASIC16.17■□□□□ 0.18
AP4S1Q9Y587 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC16.17■□□□□ 0.18
AP4S1Q9Y587 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC16.17■□□□□ 0.18
AP4S1Q9Y587 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
AP4S1Q9Y587 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
AP4S1Q9Y587 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
AP4S1Q9Y587 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
AP4S1Q9Y587 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms