Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC21.02■□□□□ 0.96
UPF2Q9HAU5 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
UPF2Q9HAU5 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
UPF2Q9HAU5 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
UPF2Q9HAU5 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC21.02■□□□□ 0.96
UPF2Q9HAU5 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
UPF2Q9HAU5 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
UPF2Q9HAU5 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
UPF2Q9HAU5 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
UPF2Q9HAU5 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
UPF2Q9HAU5 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
UPF2Q9HAU5 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC21.02■□□□□ 0.95
UPF2Q9HAU5 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
UPF2Q9HAU5 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
UPF2Q9HAU5 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
UPF2Q9HAU5 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC21.01■□□□□ 0.95
UPF2Q9HAU5 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC21.01■□□□□ 0.95
UPF2Q9HAU5 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
UPF2Q9HAU5 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC21.01■□□□□ 0.95
UPF2Q9HAU5 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
UPF2Q9HAU5 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
UPF2Q9HAU5 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
UPF2Q9HAU5 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
UPF2Q9HAU5 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC21.01■□□□□ 0.95
UPF2Q9HAU5 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC21.01■□□□□ 0.95
UPF2Q9HAU5 TSPY15P-201ENST00000457163 923 ntBASIC21.01■□□□□ 0.95
UPF2Q9HAU5 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC21.01■□□□□ 0.95
UPF2Q9HAU5 SPEG-225ENST00000617028 815 ntTSL 5 BASIC21.01■□□□□ 0.95
UPF2Q9HAU5 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
UPF2Q9HAU5 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC21.01■□□□□ 0.95
UPF2Q9HAU5 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
UPF2Q9HAU5 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
UPF2Q9HAU5 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
UPF2Q9HAU5 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
UPF2Q9HAU5 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
UPF2Q9HAU5 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
UPF2Q9HAU5 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
UPF2Q9HAU5 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
UPF2Q9HAU5 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
UPF2Q9HAU5 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC21■□□□□ 0.95
UPF2Q9HAU5 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC21■□□□□ 0.95
UPF2Q9HAU5 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC21■□□□□ 0.95
UPF2Q9HAU5 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC21■□□□□ 0.95
UPF2Q9HAU5 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
UPF2Q9HAU5 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC21■□□□□ 0.95
UPF2Q9HAU5 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
UPF2Q9HAU5 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC21■□□□□ 0.95
UPF2Q9HAU5 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
UPF2Q9HAU5 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
UPF2Q9HAU5 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC21■□□□□ 0.95
UPF2Q9HAU5 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
UPF2Q9HAU5 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
UPF2Q9HAU5 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC21■□□□□ 0.95
UPF2Q9HAU5 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC21■□□□□ 0.95
UPF2Q9HAU5 SPDYE15P-201ENST00000424157 909 ntBASIC21■□□□□ 0.95
UPF2Q9HAU5 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
UPF2Q9HAU5 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
UPF2Q9HAU5 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC21■□□□□ 0.95
UPF2Q9HAU5 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC21■□□□□ 0.95
UPF2Q9HAU5 MIR4497-201ENST00000583208 89 ntBASIC21■□□□□ 0.95
UPF2Q9HAU5 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC21■□□□□ 0.95
UPF2Q9HAU5 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
UPF2Q9HAU5 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
UPF2Q9HAU5 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC21■□□□□ 0.95
UPF2Q9HAU5 NORAD-201ENST00000565493 5339 ntBASIC21■□□□□ 0.95
UPF2Q9HAU5 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
UPF2Q9HAU5 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC21■□□□□ 0.95
UPF2Q9HAU5 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
UPF2Q9HAU5 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC21■□□□□ 0.95
UPF2Q9HAU5 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC20.99■□□□□ 0.95
UPF2Q9HAU5 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
UPF2Q9HAU5 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
UPF2Q9HAU5 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
UPF2Q9HAU5 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
UPF2Q9HAU5 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
UPF2Q9HAU5 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
UPF2Q9HAU5 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
UPF2Q9HAU5 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
UPF2Q9HAU5 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
UPF2Q9HAU5 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
UPF2Q9HAU5 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
UPF2Q9HAU5 STARP1-201ENST00000397973 869 ntBASIC20.99■□□□□ 0.95
UPF2Q9HAU5 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC20.99■□□□□ 0.95
UPF2Q9HAU5 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC20.99■□□□□ 0.95
UPF2Q9HAU5 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC20.99■□□□□ 0.95
UPF2Q9HAU5 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
UPF2Q9HAU5 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
UPF2Q9HAU5 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC20.99■□□□□ 0.95
UPF2Q9HAU5 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC20.99■□□□□ 0.95
UPF2Q9HAU5 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
UPF2Q9HAU5 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
UPF2Q9HAU5 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
UPF2Q9HAU5 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
UPF2Q9HAU5 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC20.98■□□□□ 0.95
UPF2Q9HAU5 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
UPF2Q9HAU5 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC20.98■□□□□ 0.95
UPF2Q9HAU5 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
UPF2Q9HAU5 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
UPF2Q9HAU5 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC20.98■□□□□ 0.95
UPF2Q9HAU5 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms