Protein–RNA interactions for Protein: Q9BQW3

EBF4, Transcription factor COE4, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF4Q9BQW3 SLC25A3P1-201ENST00000443844 931 ntBASIC16.68■□□□□ 0.26
EBF4Q9BQW3 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
EBF4Q9BQW3 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC16.68■□□□□ 0.26
EBF4Q9BQW3 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
EBF4Q9BQW3 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
EBF4Q9BQW3 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
EBF4Q9BQW3 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC16.68■□□□□ 0.26
EBF4Q9BQW3 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC16.68■□□□□ 0.26
EBF4Q9BQW3 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
EBF4Q9BQW3 BLK-205ENST00000529894 2017 ntTSL 5 BASIC16.68■□□□□ 0.26
EBF4Q9BQW3 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC16.68■□□□□ 0.26
EBF4Q9BQW3 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
EBF4Q9BQW3 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
EBF4Q9BQW3 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC16.68■□□□□ 0.26
EBF4Q9BQW3 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
EBF4Q9BQW3 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
EBF4Q9BQW3 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
EBF4Q9BQW3 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
EBF4Q9BQW3 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC16.67■□□□□ 0.26
EBF4Q9BQW3 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
EBF4Q9BQW3 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC16.67■□□□□ 0.26
EBF4Q9BQW3 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
EBF4Q9BQW3 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC16.67■□□□□ 0.26
EBF4Q9BQW3 FUT8-AS1-201ENST00000621019 1521 ntBASIC16.67■□□□□ 0.26
EBF4Q9BQW3 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
EBF4Q9BQW3 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
EBF4Q9BQW3 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
EBF4Q9BQW3 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC16.67■□□□□ 0.26
EBF4Q9BQW3 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
EBF4Q9BQW3 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
EBF4Q9BQW3 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
EBF4Q9BQW3 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC16.67■□□□□ 0.26
EBF4Q9BQW3 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
EBF4Q9BQW3 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC16.67■□□□□ 0.26
EBF4Q9BQW3 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
EBF4Q9BQW3 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC16.67■□□□□ 0.26
EBF4Q9BQW3 AL390719.2-201ENST00000606993 987 ntBASIC16.67■□□□□ 0.26
EBF4Q9BQW3 SPEG-225ENST00000617028 815 ntTSL 5 BASIC16.67■□□□□ 0.26
EBF4Q9BQW3 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
EBF4Q9BQW3 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
EBF4Q9BQW3 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
EBF4Q9BQW3 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
EBF4Q9BQW3 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC16.67■□□□□ 0.26
EBF4Q9BQW3 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
EBF4Q9BQW3 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC16.67■□□□□ 0.26
EBF4Q9BQW3 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC16.67■□□□□ 0.26
EBF4Q9BQW3 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
EBF4Q9BQW3 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
EBF4Q9BQW3 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
EBF4Q9BQW3 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
EBF4Q9BQW3 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
EBF4Q9BQW3 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC16.66■□□□□ 0.26
EBF4Q9BQW3 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
EBF4Q9BQW3 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
EBF4Q9BQW3 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
EBF4Q9BQW3 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
EBF4Q9BQW3 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
EBF4Q9BQW3 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
EBF4Q9BQW3 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
EBF4Q9BQW3 ANKRD20A18P-201ENST00000359341 492 ntBASIC16.66■□□□□ 0.26
EBF4Q9BQW3 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
EBF4Q9BQW3 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
EBF4Q9BQW3 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC16.66■□□□□ 0.26
EBF4Q9BQW3 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC16.66■□□□□ 0.26
EBF4Q9BQW3 MIR4497-201ENST00000583208 89 ntBASIC16.66■□□□□ 0.26
EBF4Q9BQW3 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC16.66■□□□□ 0.26
EBF4Q9BQW3 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
EBF4Q9BQW3 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
EBF4Q9BQW3 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
EBF4Q9BQW3 KRT18P22-201ENST00000402024 1347 ntBASIC16.66■□□□□ 0.26
EBF4Q9BQW3 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
EBF4Q9BQW3 ME2P1-201ENST00000426028 1970 ntBASIC16.66■□□□□ 0.26
EBF4Q9BQW3 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
EBF4Q9BQW3 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
EBF4Q9BQW3 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
EBF4Q9BQW3 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
EBF4Q9BQW3 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC16.65■□□□□ 0.26
EBF4Q9BQW3 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
EBF4Q9BQW3 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
EBF4Q9BQW3 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
EBF4Q9BQW3 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
EBF4Q9BQW3 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
EBF4Q9BQW3 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
EBF4Q9BQW3 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
EBF4Q9BQW3 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
EBF4Q9BQW3 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
EBF4Q9BQW3 COPE-203ENST00000351079 907 ntTSL 2 BASIC16.65■□□□□ 0.26
EBF4Q9BQW3 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
EBF4Q9BQW3 GXYLT1P3-201ENST00000453058 1193 ntBASIC16.65■□□□□ 0.26
EBF4Q9BQW3 AC122714.2-201ENST00000502787 707 ntBASIC16.65■□□□□ 0.26
EBF4Q9BQW3 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC16.65■□□□□ 0.26
EBF4Q9BQW3 AC111152.3-201ENST00000569699 673 ntBASIC16.65■□□□□ 0.26
EBF4Q9BQW3 RNF126P1-202ENST00000569893 925 ntBASIC16.65■□□□□ 0.26
EBF4Q9BQW3 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC16.65■□□□□ 0.26
EBF4Q9BQW3 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC16.65■□□□□ 0.26
EBF4Q9BQW3 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC16.65■□□□□ 0.26
EBF4Q9BQW3 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
EBF4Q9BQW3 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
EBF4Q9BQW3 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
EBF4Q9BQW3 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms