Protein–RNA interactions for Protein: Q99608

NDN, Necdin, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDNQ99608 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
NDNQ99608 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
NDNQ99608 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
NDNQ99608 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
NDNQ99608 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC17.19■□□□□ 0.34
NDNQ99608 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC17.19■□□□□ 0.34
NDNQ99608 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NDNQ99608 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NDNQ99608 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
NDNQ99608 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
NDNQ99608 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
NDNQ99608 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NDNQ99608 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
NDNQ99608 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC17.19■□□□□ 0.34
NDNQ99608 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
NDNQ99608 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC17.18■□□□□ 0.34
NDNQ99608 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC17.18■□□□□ 0.34
NDNQ99608 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NDNQ99608 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
NDNQ99608 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
NDNQ99608 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
NDNQ99608 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NDNQ99608 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC17.18■□□□□ 0.34
NDNQ99608 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
NDNQ99608 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
NDNQ99608 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
NDNQ99608 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
NDNQ99608 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC17.18■□□□□ 0.34
NDNQ99608 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NDNQ99608 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NDNQ99608 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC17.18■□□□□ 0.34
NDNQ99608 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NDNQ99608 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
NDNQ99608 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NDNQ99608 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC17.18■□□□□ 0.34
NDNQ99608 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC17.18■□□□□ 0.34
NDNQ99608 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC17.18■□□□□ 0.34
NDNQ99608 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC17.18■□□□□ 0.34
NDNQ99608 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
NDNQ99608 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC17.18■□□□□ 0.34
NDNQ99608 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC17.18■□□□□ 0.34
NDNQ99608 AC091076.1-201ENST00000610741 619 ntBASIC17.18■□□□□ 0.34
NDNQ99608 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC17.18■□□□□ 0.34
NDNQ99608 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC17.18■□□□□ 0.34
NDNQ99608 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
NDNQ99608 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NDNQ99608 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC17.18■□□□□ 0.34
NDNQ99608 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
NDNQ99608 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NDNQ99608 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC17.18■□□□□ 0.34
NDNQ99608 EGFEM1P-202ENST00000431685 1563 ntBASIC17.18■□□□□ 0.34
NDNQ99608 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC17.18■□□□□ 0.34
NDNQ99608 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
NDNQ99608 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NDNQ99608 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NDNQ99608 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
NDNQ99608 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC17.18■□□□□ 0.34
NDNQ99608 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
NDNQ99608 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC17.18■□□□□ 0.34
NDNQ99608 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
NDNQ99608 AC148477.5-201ENST00000625164 1645 ntBASIC17.18■□□□□ 0.34
NDNQ99608 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
NDNQ99608 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NDNQ99608 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
NDNQ99608 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
NDNQ99608 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
NDNQ99608 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC17.17■□□□□ 0.34
NDNQ99608 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NDNQ99608 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC17.17■□□□□ 0.34
NDNQ99608 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
NDNQ99608 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
NDNQ99608 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC17.17■□□□□ 0.34
NDNQ99608 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
NDNQ99608 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC17.17■□□□□ 0.34
NDNQ99608 HYMAI-201ENST00000635591 3347 ntBASIC17.17■□□□□ 0.34
NDNQ99608 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NDNQ99608 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NDNQ99608 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC17.17■□□□□ 0.34
NDNQ99608 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC17.17■□□□□ 0.34
NDNQ99608 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC17.17■□□□□ 0.34
NDNQ99608 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
NDNQ99608 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC17.17■□□□□ 0.34
NDNQ99608 NUS1P2-201ENST00000417358 873 ntBASIC17.17■□□□□ 0.34
NDNQ99608 ATP5G2P1-201ENST00000433580 426 ntBASIC17.17■□□□□ 0.34
NDNQ99608 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC17.17■□□□□ 0.34
NDNQ99608 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC17.17■□□□□ 0.34
NDNQ99608 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC17.17■□□□□ 0.34
NDNQ99608 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
NDNQ99608 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC17.17■□□□□ 0.34
NDNQ99608 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
NDNQ99608 AC092329.2-201ENST00000598402 547 ntBASIC17.17■□□□□ 0.34
NDNQ99608 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
NDNQ99608 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
NDNQ99608 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC17.17■□□□□ 0.34
NDNQ99608 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
NDNQ99608 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC17.17■□□□□ 0.34
NDNQ99608 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC17.17■□□□□ 0.34
NDNQ99608 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC17.17■□□□□ 0.34
NDNQ99608 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC17.16■□□□□ 0.34
NDNQ99608 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms