Protein–RNA interactions for Protein: Q8WVD3

RNF138, E3 ubiquitin-protein ligase RNF138, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF138Q8WVD3 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RNF138Q8WVD3 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC15.33■□□□□ 0.04
RNF138Q8WVD3 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC15.33■□□□□ 0.04
RNF138Q8WVD3 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RNF138Q8WVD3 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
RNF138Q8WVD3 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC15.33■□□□□ 0.04
RNF138Q8WVD3 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RNF138Q8WVD3 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.04
RNF138Q8WVD3 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC15.33■□□□□ 0.04
RNF138Q8WVD3 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RNF138Q8WVD3 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RNF138Q8WVD3 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC15.33■□□□□ 0.04
RNF138Q8WVD3 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
RNF138Q8WVD3 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC15.33■□□□□ 0.04
RNF138Q8WVD3 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC15.33■□□□□ 0.04
RNF138Q8WVD3 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RNF138Q8WVD3 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RNF138Q8WVD3 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RNF138Q8WVD3 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC15.32■□□□□ 0.04
RNF138Q8WVD3 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
RNF138Q8WVD3 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
RNF138Q8WVD3 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
RNF138Q8WVD3 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RNF138Q8WVD3 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
RNF138Q8WVD3 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RNF138Q8WVD3 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC15.32■□□□□ 0.04
RNF138Q8WVD3 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC15.32■□□□□ 0.04
RNF138Q8WVD3 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC15.32■□□□□ 0.04
RNF138Q8WVD3 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC15.32■□□□□ 0.04
RNF138Q8WVD3 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RNF138Q8WVD3 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RNF138Q8WVD3 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RNF138Q8WVD3 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
RNF138Q8WVD3 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RNF138Q8WVD3 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
RNF138Q8WVD3 REM2-202ENST00000536884 1331 ntTSL 2 BASIC15.32■□□□□ 0.04
RNF138Q8WVD3 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RNF138Q8WVD3 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
RNF138Q8WVD3 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
RNF138Q8WVD3 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC15.32■□□□□ 0.04
RNF138Q8WVD3 AC092919.2-201ENST00000623631 1645 ntBASIC15.32■□□□□ 0.04
RNF138Q8WVD3 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RNF138Q8WVD3 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC15.32■□□□□ 0.04
RNF138Q8WVD3 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
RNF138Q8WVD3 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RNF138Q8WVD3 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
RNF138Q8WVD3 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RNF138Q8WVD3 SLC9A3P2-201ENST00000447821 2021 ntBASIC15.31■□□□□ 0.04
RNF138Q8WVD3 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
RNF138Q8WVD3 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
RNF138Q8WVD3 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RNF138Q8WVD3 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RNF138Q8WVD3 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RNF138Q8WVD3 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RNF138Q8WVD3 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RNF138Q8WVD3 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC15.31■□□□□ 0.04
RNF138Q8WVD3 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RNF138Q8WVD3 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
RNF138Q8WVD3 PMS2P4-201ENST00000412466 1052 ntBASIC15.31■□□□□ 0.04
RNF138Q8WVD3 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC15.31■□□□□ 0.04
RNF138Q8WVD3 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC15.31■□□□□ 0.04
RNF138Q8WVD3 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RNF138Q8WVD3 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC15.31■□□□□ 0.04
RNF138Q8WVD3 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
RNF138Q8WVD3 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC15.31■□□□□ 0.04
RNF138Q8WVD3 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC15.31■□□□□ 0.04
RNF138Q8WVD3 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC15.31■□□□□ 0.04
RNF138Q8WVD3 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
RNF138Q8WVD3 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC15.31■□□□□ 0.04
RNF138Q8WVD3 CALM1-205ENST00000553542 877 ntTSL 5 BASIC15.31■□□□□ 0.04
RNF138Q8WVD3 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC15.31■□□□□ 0.04
RNF138Q8WVD3 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC15.31■□□□□ 0.04
RNF138Q8WVD3 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
RNF138Q8WVD3 MTDHP5-201ENST00000598980 586 ntBASIC15.31■□□□□ 0.04
RNF138Q8WVD3 AL009183.1-201ENST00000603760 355 ntBASIC15.31■□□□□ 0.04
RNF138Q8WVD3 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC15.31■□□□□ 0.04
RNF138Q8WVD3 AL031055.1-201ENST00000606362 631 ntBASIC15.31■□□□□ 0.04
RNF138Q8WVD3 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC15.31■□□□□ 0.04
RNF138Q8WVD3 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC15.31■□□□□ 0.04
RNF138Q8WVD3 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
RNF138Q8WVD3 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RNF138Q8WVD3 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RNF138Q8WVD3 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC15.31■□□□□ 0.04
RNF138Q8WVD3 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RNF138Q8WVD3 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
RNF138Q8WVD3 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC15.31■□□□□ 0.04
RNF138Q8WVD3 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
RNF138Q8WVD3 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RNF138Q8WVD3 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RNF138Q8WVD3 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RNF138Q8WVD3 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
RNF138Q8WVD3 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RNF138Q8WVD3 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
RNF138Q8WVD3 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
RNF138Q8WVD3 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC15.3■□□□□ 0.04
RNF138Q8WVD3 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RNF138Q8WVD3 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RNF138Q8WVD3 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
RNF138Q8WVD3 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RNF138Q8WVD3 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms