Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 STK4-201ENST00000372801 2038 ntTSL 2 BASIC17.31■□□□□ 0.36
SYNPOQ8N3V7 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC17.31■□□□□ 0.36
SYNPOQ8N3V7 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SYNPOQ8N3V7 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SYNPOQ8N3V7 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SYNPOQ8N3V7 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SYNPOQ8N3V7 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SYNPOQ8N3V7 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC17.31■□□□□ 0.36
SYNPOQ8N3V7 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SYNPOQ8N3V7 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
SYNPOQ8N3V7 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SYNPOQ8N3V7 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SYNPOQ8N3V7 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SYNPOQ8N3V7 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
SYNPOQ8N3V7 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SYNPOQ8N3V7 KLF2P3-201ENST00000451977 1087 ntBASIC17.31■□□□□ 0.36
SYNPOQ8N3V7 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC17.31■□□□□ 0.36
SYNPOQ8N3V7 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC17.31■□□□□ 0.36
SYNPOQ8N3V7 AL135744.1-201ENST00000565098 629 ntBASIC17.31■□□□□ 0.36
SYNPOQ8N3V7 AC005412.3-201ENST00000580309 715 ntBASIC17.31■□□□□ 0.36
SYNPOQ8N3V7 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SYNPOQ8N3V7 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SYNPOQ8N3V7 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SYNPOQ8N3V7 LINC01451-201ENST00000623792 534 ntBASIC17.31■□□□□ 0.36
SYNPOQ8N3V7 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SYNPOQ8N3V7 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
SYNPOQ8N3V7 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
SYNPOQ8N3V7 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC17.31■□□□□ 0.36
SYNPOQ8N3V7 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SYNPOQ8N3V7 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SYNPOQ8N3V7 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
SYNPOQ8N3V7 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC17.31■□□□□ 0.36
SYNPOQ8N3V7 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC17.31■□□□□ 0.36
SYNPOQ8N3V7 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SYNPOQ8N3V7 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC17.31■□□□□ 0.36
SYNPOQ8N3V7 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SYNPOQ8N3V7 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
SYNPOQ8N3V7 LINC00896-202ENST00000609602 2128 ntBASIC17.3■□□□□ 0.36
SYNPOQ8N3V7 LTB4R2-202ENST00000528054 3092 ntBASIC17.3■□□□□ 0.36
SYNPOQ8N3V7 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SYNPOQ8N3V7 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC17.3■□□□□ 0.36
SYNPOQ8N3V7 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC17.3■□□□□ 0.36
SYNPOQ8N3V7 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC17.3■□□□□ 0.36
SYNPOQ8N3V7 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SYNPOQ8N3V7 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SYNPOQ8N3V7 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
SYNPOQ8N3V7 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC17.3■□□□□ 0.36
SYNPOQ8N3V7 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SYNPOQ8N3V7 KLK8-202ENST00000320838 456 ntTSL 5 BASIC17.3■□□□□ 0.36
SYNPOQ8N3V7 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SYNPOQ8N3V7 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC17.3■□□□□ 0.36
SYNPOQ8N3V7 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC17.3■□□□□ 0.36
SYNPOQ8N3V7 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
SYNPOQ8N3V7 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC17.3■□□□□ 0.36
SYNPOQ8N3V7 PNKD-204ENST00000436005 978 ntTSL 5 BASIC17.3■□□□□ 0.36
SYNPOQ8N3V7 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC17.3■□□□□ 0.36
SYNPOQ8N3V7 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SYNPOQ8N3V7 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
SYNPOQ8N3V7 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC17.3■□□□□ 0.36
SYNPOQ8N3V7 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC17.3■□□□□ 0.36
SYNPOQ8N3V7 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC17.3■□□□□ 0.36
SYNPOQ8N3V7 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SYNPOQ8N3V7 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC17.3■□□□□ 0.36
SYNPOQ8N3V7 MMP17-203ENST00000535004 719 ntTSL 3 BASIC17.3■□□□□ 0.36
SYNPOQ8N3V7 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC17.3■□□□□ 0.36
SYNPOQ8N3V7 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC17.3■□□□□ 0.36
SYNPOQ8N3V7 INO80E-210ENST00000567705 880 ntTSL 3 BASIC17.3■□□□□ 0.36
SYNPOQ8N3V7 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC17.3■□□□□ 0.36
SYNPOQ8N3V7 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SYNPOQ8N3V7 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SYNPOQ8N3V7 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SYNPOQ8N3V7 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SYNPOQ8N3V7 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SYNPOQ8N3V7 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
SYNPOQ8N3V7 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC17.3■□□□□ 0.36
SYNPOQ8N3V7 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SYNPOQ8N3V7 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SYNPOQ8N3V7 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
SYNPOQ8N3V7 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SYNPOQ8N3V7 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
SYNPOQ8N3V7 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC17.29■□□□□ 0.36
SYNPOQ8N3V7 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
SYNPOQ8N3V7 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SYNPOQ8N3V7 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SYNPOQ8N3V7 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
SYNPOQ8N3V7 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
SYNPOQ8N3V7 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC17.29■□□□□ 0.36
SYNPOQ8N3V7 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC17.29■□□□□ 0.36
SYNPOQ8N3V7 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC17.29■□□□□ 0.36
SYNPOQ8N3V7 IGHV3-62-201ENST00000520057 340 ntBASIC17.29■□□□□ 0.36
SYNPOQ8N3V7 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC17.29■□□□□ 0.36
SYNPOQ8N3V7 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC17.29■□□□□ 0.36
SYNPOQ8N3V7 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC17.29■□□□□ 0.36
SYNPOQ8N3V7 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC17.29■□□□□ 0.36
SYNPOQ8N3V7 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SYNPOQ8N3V7 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SYNPOQ8N3V7 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
SYNPOQ8N3V7 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SYNPOQ8N3V7 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SYNPOQ8N3V7 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms