Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
LINC00346Q8IVM7 AL118508.1-201ENST00000613502 2345 ntBASIC15.16■□□□□ 0.02
LINC00346Q8IVM7 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LINC00346Q8IVM7 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
LINC00346Q8IVM7 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LINC00346Q8IVM7 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
LINC00346Q8IVM7 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC15.16■□□□□ 0.02
LINC00346Q8IVM7 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC15.15■□□□□ 0.02
LINC00346Q8IVM7 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
LINC00346Q8IVM7 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC15.15■□□□□ 0.02
LINC00346Q8IVM7 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LINC00346Q8IVM7 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
LINC00346Q8IVM7 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LINC00346Q8IVM7 GPR89P-201ENST00000407924 1495 ntBASIC15.15■□□□□ 0.02
LINC00346Q8IVM7 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LINC00346Q8IVM7 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
LINC00346Q8IVM7 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LINC00346Q8IVM7 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LINC00346Q8IVM7 AC078925.2-201ENST00000624013 1973 ntBASIC15.15■□□□□ 0.02
LINC00346Q8IVM7 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
LINC00346Q8IVM7 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
LINC00346Q8IVM7 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
LINC00346Q8IVM7 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LINC00346Q8IVM7 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LINC00346Q8IVM7 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
LINC00346Q8IVM7 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
LINC00346Q8IVM7 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
LINC00346Q8IVM7 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LINC00346Q8IVM7 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC15.15■□□□□ 0.02
LINC00346Q8IVM7 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC15.15■□□□□ 0.02
LINC00346Q8IVM7 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
LINC00346Q8IVM7 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
LINC00346Q8IVM7 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
LINC00346Q8IVM7 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
LINC00346Q8IVM7 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
LINC00346Q8IVM7 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC15.15■□□□□ 0.02
LINC00346Q8IVM7 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC15.15■□□□□ 0.02
LINC00346Q8IVM7 NT5C-211ENST00000582170 653 ntTSL 3 BASIC15.15■□□□□ 0.02
LINC00346Q8IVM7 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC15.15■□□□□ 0.02
LINC00346Q8IVM7 GZMM-202ENST00000592501 941 ntTSL 3 BASIC15.15■□□□□ 0.02
LINC00346Q8IVM7 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC15.15■□□□□ 0.02
LINC00346Q8IVM7 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC15.15■□□□□ 0.02
LINC00346Q8IVM7 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC15.15■□□□□ 0.02
LINC00346Q8IVM7 FRMD8P1-201ENST00000440433 1524 ntBASIC15.15■□□□□ 0.02
LINC00346Q8IVM7 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
LINC00346Q8IVM7 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
LINC00346Q8IVM7 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
LINC00346Q8IVM7 AC092171.3-201ENST00000610122 2651 ntBASIC15.15■□□□□ 0.02
LINC00346Q8IVM7 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LINC00346Q8IVM7 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
LINC00346Q8IVM7 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LINC00346Q8IVM7 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
LINC00346Q8IVM7 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
LINC00346Q8IVM7 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC15.15■□□□□ 0.02
LINC00346Q8IVM7 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC15.15■□□□□ 0.02
LINC00346Q8IVM7 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LINC00346Q8IVM7 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
LINC00346Q8IVM7 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LINC00346Q8IVM7 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LINC00346Q8IVM7 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LINC00346Q8IVM7 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
LINC00346Q8IVM7 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LINC00346Q8IVM7 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
LINC00346Q8IVM7 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
LINC00346Q8IVM7 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LINC00346Q8IVM7 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC15.14■□□□□ 0.01
LINC00346Q8IVM7 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LINC00346Q8IVM7 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LINC00346Q8IVM7 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LINC00346Q8IVM7 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
LINC00346Q8IVM7 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
LINC00346Q8IVM7 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
LINC00346Q8IVM7 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
LINC00346Q8IVM7 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
LINC00346Q8IVM7 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC15.14■□□□□ 0.01
LINC00346Q8IVM7 SPDYE21P-201ENST00000413323 827 ntBASIC15.14■□□□□ 0.01
LINC00346Q8IVM7 ABCD1P5-201ENST00000445663 754 ntBASIC15.14■□□□□ 0.01
LINC00346Q8IVM7 NUS1P1-201ENST00000446295 882 ntBASIC15.14■□□□□ 0.01
LINC00346Q8IVM7 COPE-211ENST00000600932 1144 ntTSL 5 BASIC15.14■□□□□ 0.01
LINC00346Q8IVM7 AL591684.3-201ENST00000605187 298 ntBASIC15.14■□□□□ 0.01
LINC00346Q8IVM7 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC15.14■□□□□ 0.01
LINC00346Q8IVM7 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC15.14■□□□□ 0.01
LINC00346Q8IVM7 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
LINC00346Q8IVM7 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
LINC00346Q8IVM7 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC15.14■□□□□ 0.01
LINC00346Q8IVM7 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
LINC00346Q8IVM7 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC15.14■□□□□ 0.01
LINC00346Q8IVM7 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LINC00346Q8IVM7 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC15.14■□□□□ 0.01
LINC00346Q8IVM7 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
LINC00346Q8IVM7 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
LINC00346Q8IVM7 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
LINC00346Q8IVM7 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
LINC00346Q8IVM7 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LINC00346Q8IVM7 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC15.13■□□□□ 0.01
LINC00346Q8IVM7 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
LINC00346Q8IVM7 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
LINC00346Q8IVM7 AC097637.2-201ENST00000624096 1997 ntBASIC15.13■□□□□ 0.01
LINC00346Q8IVM7 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LINC00346Q8IVM7 AC004817.3-201ENST00000602957 2129 ntBASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 62.5 ms