Protein–RNA interactions for Protein: Q86WS4

C12orf40, Uncharacterized protein C12orf40, humanhuman

Predictions only

Length 652 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf40Q86WS4 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
C12orf40Q86WS4 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
C12orf40Q86WS4 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
C12orf40Q86WS4 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
C12orf40Q86WS4 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
C12orf40Q86WS4 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC17.29■□□□□ 0.36
C12orf40Q86WS4 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
C12orf40Q86WS4 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
C12orf40Q86WS4 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
C12orf40Q86WS4 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
C12orf40Q86WS4 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC17.29■□□□□ 0.36
C12orf40Q86WS4 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
C12orf40Q86WS4 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
C12orf40Q86WS4 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
C12orf40Q86WS4 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC17.29■□□□□ 0.36
C12orf40Q86WS4 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
C12orf40Q86WS4 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
C12orf40Q86WS4 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
C12orf40Q86WS4 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
C12orf40Q86WS4 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
C12orf40Q86WS4 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
C12orf40Q86WS4 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
C12orf40Q86WS4 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
C12orf40Q86WS4 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
C12orf40Q86WS4 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
C12orf40Q86WS4 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
C12orf40Q86WS4 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
C12orf40Q86WS4 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC17.29■□□□□ 0.36
C12orf40Q86WS4 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
C12orf40Q86WS4 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC17.29■□□□□ 0.36
C12orf40Q86WS4 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
C12orf40Q86WS4 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC17.29■□□□□ 0.36
C12orf40Q86WS4 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
C12orf40Q86WS4 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
C12orf40Q86WS4 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
C12orf40Q86WS4 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
C12orf40Q86WS4 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
C12orf40Q86WS4 HARS-204ENST00000438307 1789 ntTSL 2 BASIC17.28■□□□□ 0.36
C12orf40Q86WS4 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC17.28■□□□□ 0.36
C12orf40Q86WS4 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
C12orf40Q86WS4 BOC-212ENST00000485230 2173 ntTSL 2 BASIC17.28■□□□□ 0.36
C12orf40Q86WS4 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
C12orf40Q86WS4 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC17.28■□□□□ 0.36
C12orf40Q86WS4 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
C12orf40Q86WS4 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
C12orf40Q86WS4 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
C12orf40Q86WS4 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
C12orf40Q86WS4 HLA-DRB6-201ENST00000411500 1235 ntBASIC17.28■□□□□ 0.36
C12orf40Q86WS4 SPCS2P4-201ENST00000436160 681 ntBASIC17.28■□□□□ 0.36
C12orf40Q86WS4 RN7SL589P-201ENST00000481268 310 ntBASIC17.28■□□□□ 0.36
C12orf40Q86WS4 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC17.28■□□□□ 0.36
C12orf40Q86WS4 AC025678.2-201ENST00000562061 970 ntBASIC17.28■□□□□ 0.36
C12orf40Q86WS4 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC17.28■□□□□ 0.36
C12orf40Q86WS4 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC17.28■□□□□ 0.36
C12orf40Q86WS4 Z92544.3-201ENST00000624747 417 ntBASIC17.28■□□□□ 0.36
C12orf40Q86WS4 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
C12orf40Q86WS4 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
C12orf40Q86WS4 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
C12orf40Q86WS4 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
C12orf40Q86WS4 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
C12orf40Q86WS4 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
C12orf40Q86WS4 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
C12orf40Q86WS4 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
C12orf40Q86WS4 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
C12orf40Q86WS4 AC018470.1-201ENST00000624790 3129 ntBASIC17.27■□□□□ 0.36
C12orf40Q86WS4 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC17.27■□□□□ 0.36
C12orf40Q86WS4 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
C12orf40Q86WS4 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC17.27■□□□□ 0.36
C12orf40Q86WS4 AC116353.5-201ENST00000638148 1699 ntBASIC17.27■□□□□ 0.36
C12orf40Q86WS4 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
C12orf40Q86WS4 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
C12orf40Q86WS4 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
C12orf40Q86WS4 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
C12orf40Q86WS4 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
C12orf40Q86WS4 GPS2P2-201ENST00000430745 888 ntBASIC17.27■□□□□ 0.36
C12orf40Q86WS4 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
C12orf40Q86WS4 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
C12orf40Q86WS4 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC17.27■□□□□ 0.36
C12orf40Q86WS4 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
C12orf40Q86WS4 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC17.27■□□□□ 0.36
C12orf40Q86WS4 AC005498.2-205ENST00000593218 784 ntBASIC17.27■□□□□ 0.36
C12orf40Q86WS4 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
C12orf40Q86WS4 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
C12orf40Q86WS4 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.35
C12orf40Q86WS4 AC016396.2-201ENST00000562575 1417 ntBASIC17.27■□□□□ 0.35
C12orf40Q86WS4 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC17.27■□□□□ 0.35
C12orf40Q86WS4 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
C12orf40Q86WS4 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
C12orf40Q86WS4 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.35
C12orf40Q86WS4 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
C12orf40Q86WS4 TOP3BP1-201ENST00000420768 1380 ntBASIC17.27■□□□□ 0.35
C12orf40Q86WS4 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
C12orf40Q86WS4 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.35
C12orf40Q86WS4 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC17.26■□□□□ 0.35
C12orf40Q86WS4 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
C12orf40Q86WS4 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
C12orf40Q86WS4 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC17.26■□□□□ 0.35
C12orf40Q86WS4 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
C12orf40Q86WS4 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC17.26■□□□□ 0.35
C12orf40Q86WS4 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 63.4 ms