Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC17.18■□□□□ 0.34
LYSMD3Q7Z3D4 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LYSMD3Q7Z3D4 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC17.18■□□□□ 0.34
LYSMD3Q7Z3D4 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
LYSMD3Q7Z3D4 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
LYSMD3Q7Z3D4 LTF-203ENST00000426532 2494 ntTSL 2 BASIC17.18■□□□□ 0.34
LYSMD3Q7Z3D4 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LYSMD3Q7Z3D4 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LYSMD3Q7Z3D4 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC17.17■□□□□ 0.34
LYSMD3Q7Z3D4 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC17.17■□□□□ 0.34
LYSMD3Q7Z3D4 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
LYSMD3Q7Z3D4 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.17■□□□□ 0.34
LYSMD3Q7Z3D4 AC022211.2-201ENST00000585075 2527 ntBASIC17.17■□□□□ 0.34
LYSMD3Q7Z3D4 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC17.17■□□□□ 0.34
LYSMD3Q7Z3D4 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
LYSMD3Q7Z3D4 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC17.17■□□□□ 0.34
LYSMD3Q7Z3D4 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LYSMD3Q7Z3D4 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.17■□□□□ 0.34
LYSMD3Q7Z3D4 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LYSMD3Q7Z3D4 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC17.17■□□□□ 0.34
LYSMD3Q7Z3D4 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LYSMD3Q7Z3D4 AL590627.1-203ENST00000421194 1026 ntBASIC17.17■□□□□ 0.34
LYSMD3Q7Z3D4 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC17.17■□□□□ 0.34
LYSMD3Q7Z3D4 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
LYSMD3Q7Z3D4 AC098831.1-202ENST00000438821 336 ntBASIC17.17■□□□□ 0.34
LYSMD3Q7Z3D4 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
LYSMD3Q7Z3D4 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC17.17■□□□□ 0.34
LYSMD3Q7Z3D4 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC17.17■□□□□ 0.34
LYSMD3Q7Z3D4 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC17.17■□□□□ 0.34
LYSMD3Q7Z3D4 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC17.17■□□□□ 0.34
LYSMD3Q7Z3D4 BX640515.1-201ENST00000617215 977 ntBASIC17.17■□□□□ 0.34
LYSMD3Q7Z3D4 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC17.17■□□□□ 0.34
LYSMD3Q7Z3D4 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC17.17■□□□□ 0.34
LYSMD3Q7Z3D4 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC17.17■□□□□ 0.34
LYSMD3Q7Z3D4 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
LYSMD3Q7Z3D4 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LYSMD3Q7Z3D4 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LYSMD3Q7Z3D4 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC17.17■□□□□ 0.34
LYSMD3Q7Z3D4 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LYSMD3Q7Z3D4 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
LYSMD3Q7Z3D4 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
LYSMD3Q7Z3D4 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
LYSMD3Q7Z3D4 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
LYSMD3Q7Z3D4 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LYSMD3Q7Z3D4 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
LYSMD3Q7Z3D4 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
LYSMD3Q7Z3D4 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LYSMD3Q7Z3D4 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
LYSMD3Q7Z3D4 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC17.16■□□□□ 0.34
LYSMD3Q7Z3D4 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC17.16■□□□□ 0.34
LYSMD3Q7Z3D4 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LYSMD3Q7Z3D4 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
LYSMD3Q7Z3D4 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
LYSMD3Q7Z3D4 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
LYSMD3Q7Z3D4 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
LYSMD3Q7Z3D4 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC17.16■□□□□ 0.34
LYSMD3Q7Z3D4 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LYSMD3Q7Z3D4 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC17.16■□□□□ 0.34
LYSMD3Q7Z3D4 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
LYSMD3Q7Z3D4 NKILA-202ENST00000614771 2598 ntBASIC17.16■□□□□ 0.34
LYSMD3Q7Z3D4 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
LYSMD3Q7Z3D4 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
LYSMD3Q7Z3D4 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
LYSMD3Q7Z3D4 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
LYSMD3Q7Z3D4 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LYSMD3Q7Z3D4 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
LYSMD3Q7Z3D4 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
LYSMD3Q7Z3D4 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LYSMD3Q7Z3D4 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC17.16■□□□□ 0.34
LYSMD3Q7Z3D4 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
LYSMD3Q7Z3D4 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC17.16■□□□□ 0.34
LYSMD3Q7Z3D4 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC17.16■□□□□ 0.34
LYSMD3Q7Z3D4 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC17.16■□□□□ 0.34
LYSMD3Q7Z3D4 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC17.16■□□□□ 0.34
LYSMD3Q7Z3D4 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC17.16■□□□□ 0.34
LYSMD3Q7Z3D4 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LYSMD3Q7Z3D4 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LYSMD3Q7Z3D4 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC17.16■□□□□ 0.34
LYSMD3Q7Z3D4 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
LYSMD3Q7Z3D4 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
LYSMD3Q7Z3D4 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LYSMD3Q7Z3D4 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LYSMD3Q7Z3D4 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
LYSMD3Q7Z3D4 AC060834.1-201ENST00000443027 2032 ntBASIC17.16■□□□□ 0.34
LYSMD3Q7Z3D4 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
LYSMD3Q7Z3D4 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC17.16■□□□□ 0.34
LYSMD3Q7Z3D4 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
LYSMD3Q7Z3D4 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
LYSMD3Q7Z3D4 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LYSMD3Q7Z3D4 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LYSMD3Q7Z3D4 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LYSMD3Q7Z3D4 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LYSMD3Q7Z3D4 AC011676.5-201ENST00000624864 2660 ntBASIC17.15■□□□□ 0.34
LYSMD3Q7Z3D4 STX3-203ENST00000529177 1571 ntTSL 2 BASIC17.15■□□□□ 0.34
LYSMD3Q7Z3D4 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC17.15■□□□□ 0.34
LYSMD3Q7Z3D4 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LYSMD3Q7Z3D4 PKD1P1-201ENST00000458669 6805 ntBASIC17.15■□□□□ 0.34
LYSMD3Q7Z3D4 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LYSMD3Q7Z3D4 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LYSMD3Q7Z3D4 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 71.5 ms