Protein–RNA interactions for Protein: Q71RC2

LARP4, La-related protein 4, humanhuman

Known RBP eCLIP

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LARP4Q71RC2 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.141e-9■□□□□ 8.5
LARP4Q71RC2 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC15.84■□□□□ 0.131e-9■□□□□ 8.5
LARP4Q71RC2 TAX1BP1-207ENST00000433216 3174 ntTSL 2 BASIC13.14□□□□□ -0.311e-9■□□□□ 8.5
LARP4Q71RC2 LUC7L3-214ENST00000508482 1597 ntTSL 212.18□□□□□ -0.461e-9■□□□□ 8.5
LARP4Q71RC2 LUC7L3-205ENST00000504065 1071 ntTSL 57.02□□□□□ -1.291e-9■□□□□ 8.5
LARP4Q71RC2 LUC7L3-219ENST00000511974 507 ntTSL 35.73□□□□□ -1.491e-9■□□□□ 8.5
LARP4Q71RC2 TAX1BP1-212ENST00000494033 770 ntTSL 35.64□□□□□ -1.511e-9■□□□□ 8.5
LARP4Q71RC2 TAX1BP1-204ENST00000416801 2221 ntTSL 25.12□□□□□ -1.591e-9■□□□□ 8.5
LARP4Q71RC2 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.631e-9■□□□□ 8.5
LARP4Q71RC2 LUC7L3-216ENST00000509487 647 ntTSL 34.7□□□□□ -1.661e-9■□□□□ 8.5
LARP4Q71RC2 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.751e-9■□□□□ 8.5
LARP4Q71RC2 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.61□□□□□ -1.831e-9■□□□□ 8.5
LARP4Q71RC2 LUC7L3-222ENST00000513969 419 ntTSL 32.64□□□□□ -1.991e-9■□□□□ 8.5
LARP4Q71RC2 COL9A3-206ENST00000466532 539 ntTSL 217.39■□□□□ 0.372e-11■□□□□ 8.5
LARP4Q71RC2 MGST1-215ENST00000540056 546 ntTSL 3 BASIC4.52□□□□□ -1.692e-11■□□□□ 8.5
LARP4Q71RC2 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC30.1■■■□□ 2.418e-9■□□□□ 8.5
LARP4Q71RC2 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC23.67■■□□□ 1.388e-9■□□□□ 8.5
LARP4Q71RC2 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC23.12■■□□□ 1.298e-7■□□□□ 8.5
LARP4Q71RC2 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 18e-7■□□□□ 8.5
LARP4Q71RC2 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC16.81■□□□□ 0.285e-14■□□□□ 8.5
LARP4Q71RC2 COPS6-210ENST00000496358 610 ntTSL 216.81■□□□□ 0.288e-7■□□□□ 8.5
LARP4Q71RC2 COPS6-207ENST00000472107 835 ntTSL 216.24■□□□□ 0.198e-7■□□□□ 8.5
LARP4Q71RC2 KHSRP-205ENST00000595223 956 ntTSL 516.07■□□□□ 0.168e-9■□□□□ 8.5
LARP4Q71RC2 COPS6-203ENST00000419210 218 ntTSL 316■□□□□ 0.158e-7■□□□□ 8.5
LARP4Q71RC2 COPS6-206ENST00000468499 745 ntTSL 315.83■□□□□ 0.128e-7■□□□□ 8.5
LARP4Q71RC2 COPS6-205ENST00000465027 1171 ntTSL 1 (best)14.82□□□□□ -0.048e-7■□□□□ 8.5
LARP4Q71RC2 GAMT-204ENST00000640164 520 ntTSL 214.47□□□□□ -0.095e-14■□□□□ 8.5
LARP4Q71RC2 SF3A2-204ENST00000589118 759 ntTSL 213.54□□□□□ -0.248e-9■□□□□ 8.5
LARP4Q71RC2 SF3A2-202ENST00000586396 543 ntAPPRIS ALT2 TSL 313.51□□□□□ -0.258e-9■□□□□ 8.5
LARP4Q71RC2 SF3A2-207ENST00000592839 724 ntTSL 213.51□□□□□ -0.258e-9■□□□□ 8.5
LARP4Q71RC2 SF3A2-206ENST00000592314 885 ntTSL 513.3□□□□□ -0.288e-9■□□□□ 8.5
LARP4Q71RC2 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.288e-7■□□□□ 8.5
LARP4Q71RC2 KHSRP-203ENST00000594745 379 ntTSL 313.04□□□□□ -0.328e-9■□□□□ 8.5
LARP4Q71RC2 C5orf15-201ENST00000231512 2358 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.358e-7■□□□□ 8.5
LARP4Q71RC2 PFDN5-220ENST00000628881 231 ntTSL 3 BASIC12.61□□□□□ -0.398e-7■□□□□ 8.5
LARP4Q71RC2 SF3A2-205ENST00000590034 573 ntTSL 312.55□□□□□ -0.48e-9■□□□□ 8.5
LARP4Q71RC2 SUPT5H-218ENST00000600818 718 ntTSL 212.43□□□□□ -0.422e-11■□□□□ 8.5
LARP4Q71RC2 SZRD1-201ENST00000401088 3636 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.468e-7■□□□□ 8.5
LARP4Q71RC2 SUPT5H-201ENST00000359191 3770 ntAPPRIS ALT1 TSL 1 (best) BASIC11.63□□□□□ -0.552e-11■□□□□ 8.5
LARP4Q71RC2 SUPT5H-203ENST00000402194 3698 ntAPPRIS ALT1 TSL 1 (best) BASIC11.5□□□□□ -0.572e-11■□□□□ 8.5
LARP4Q71RC2 RNPEP-206ENST00000471105 2093 ntTSL 1 (best)11.45□□□□□ -0.588e-7■□□□□ 8.5
LARP4Q71RC2 PLEC-202ENST00000345136 14803 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.68e-7■□□□□ 8.5
LARP4Q71RC2 PLEC-208ENST00000436759 14787 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.618e-7■□□□□ 8.5
LARP4Q71RC2 PFDN5-208ENST00000549995 598 ntTSL 311.07□□□□□ -0.648e-7■□□□□ 8.5
LARP4Q71RC2 SUPT5H-215ENST00000599117 3902 ntAPPRIS P3 TSL 5 BASIC10.94□□□□□ -0.662e-11■□□□□ 8.5
LARP4Q71RC2 PLEC-201ENST00000322810 15249 ntAPPRIS P4 TSL 1 (best) BASIC10.86□□□□□ -0.678e-7■□□□□ 8.5
LARP4Q71RC2 SUPT5H-204ENST00000432763 3710 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.682e-11■□□□□ 8.5
LARP4Q71RC2 SUPT5H-213ENST00000598725 3742 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.72e-11■□□□□ 8.5
LARP4Q71RC2 MYL6B-209ENST00000551834 562 ntTSL 410.34□□□□□ -0.758e-7■□□□□ 8.5
LARP4Q71RC2 PLEC-204ENST00000354958 14751 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.768e-7■□□□□ 8.5
LARP4Q71RC2 PLEC-205ENST00000356346 14683 ntTSL 1 (best) BASIC10.21□□□□□ -0.788e-7■□□□□ 8.5
LARP4Q71RC2 PLEC-206ENST00000357649 14689 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.788e-7■□□□□ 8.5
LARP4Q71RC2 PLEC-203ENST00000354589 14736 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.798e-7■□□□□ 8.5
LARP4Q71RC2 SZRD1-210ENST00000492354 3401 ntTSL 1 (best) BASIC9.47□□□□□ -0.898e-7■□□□□ 8.5
LARP4Q71RC2 PLEC-207ENST00000398774 14646 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.98e-7■□□□□ 8.5
LARP4Q71RC2 SZRD1-202ENST00000401089 3447 ntTSL 2 BASIC9.39□□□□□ -0.918e-7■□□□□ 8.5
LARP4Q71RC2 PFDN5-215ENST00000551223 478 ntTSL 48.79□□□□□ -18e-7■□□□□ 8.5
LARP4Q71RC2 NDUFS8-209ENST00000526542 372 ntTSL 37.85□□□□□ -1.158e-7■□□□□ 8.5
LARP4Q71RC2 KHSRP-208ENST00000597656 328 ntTSL 57.85□□□□□ -1.158e-9■□□□□ 8.5
LARP4Q71RC2 PFDN5-209ENST00000550069 599 ntTSL 26.14□□□□□ -1.438e-7■□□□□ 8.5
LARP4Q71RC2 PFDN5-205ENST00000547228 726 ntTSL 55.07□□□□□ -1.68e-7■□□□□ 8.5
LARP4Q71RC2 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.828e-10■□□□□ 8.5
LARP4Q71RC2 LRRC75A-AS1-218ENST00000578380 310 ntTSL 320.09■□□□□ 0.812e-11■□□□□ 8.5
LARP4Q71RC2 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.054e-32■□□□□ 8.5
LARP4Q71RC2 CPSF1-202ENST00000527827 619 ntTSL 221.29■■□□□ 12e-8■□□□□ 8.4
LARP4Q71RC2 SEPT11-210ENST00000510641 1870 ntTSL 1 (best)17.43■□□□□ 0.382e-8■□□□□ 8.4
LARP4Q71RC2 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.382e-8■□□□□ 8.4
LARP4Q71RC2 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC16.61■□□□□ 0.252e-8■□□□□ 8.4
LARP4Q71RC2 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC16.14■□□□□ 0.172e-8■□□□□ 8.4
LARP4Q71RC2 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.032e-8■□□□□ 8.4
LARP4Q71RC2 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC15.15■□□□□ 0.022e-8■□□□□ 8.4
LARP4Q71RC2 CPSF1-205ENST00000531042 580 ntTSL 514.33□□□□□ -0.122e-8■□□□□ 8.4
LARP4Q71RC2 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.262e-8■□□□□ 8.4
LARP4Q71RC2 NAA15-201ENST00000296543 6222 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.352e-8■□□□□ 8.4
LARP4Q71RC2 NAA15-202ENST00000398947 6072 ntAPPRIS ALT1 TSL 5 BASIC12.16□□□□□ -0.462e-8■□□□□ 8.4
LARP4Q71RC2 MACF1-216ENST00000476350 5304 ntTSL 28.37□□□□□ -1.072e-8■□□□□ 8.4
LARP4Q71RC2 MACF1-229ENST00000530262 6257 ntTSL 56.89□□□□□ -1.312e-8■□□□□ 8.4
LARP4Q71RC2 SEPT11-208ENST00000506731 659 ntTSL 56.77□□□□□ -1.332e-8■□□□□ 8.4
LARP4Q71RC2 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC6.57□□□□□ -1.362e-8■□□□□ 8.4
LARP4Q71RC2 SEPT11-202ENST00000502401 276 ntTSL 55.84□□□□□ -1.472e-8■□□□□ 8.4
LARP4Q71RC2 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC5.6□□□□□ -1.512e-8■□□□□ 8.4
LARP4Q71RC2 MACF1-205ENST00000372925 14496 ntTSL 55.5□□□□□ -1.532e-8■□□□□ 8.4
LARP4Q71RC2 SEPT11-212ENST00000512575 587 ntTSL 45.2□□□□□ -1.582e-8■□□□□ 8.4
LARP4Q71RC2 SEPT11-214ENST00000513373 546 ntTSL 25.08□□□□□ -1.62e-8■□□□□ 8.4
LARP4Q71RC2 RAD21-204ENST00000518055 896 ntTSL 2 BASIC5.04□□□□□ -1.62e-8■□□□□ 8.4
LARP4Q71RC2 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.68□□□□□ -1.662e-8■□□□□ 8.4
LARP4Q71RC2 SEPT11-215ENST00000513697 328 ntTSL 24.67□□□□□ -1.662e-8■□□□□ 8.4
LARP4Q71RC2 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.752e-8■□□□□ 8.4
LARP4Q71RC2 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC4.12□□□□□ -1.752e-8■□□□□ 8.4
LARP4Q71RC2 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.822e-8■□□□□ 8.4
LARP4Q71RC2 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.31□□□□□ -1.882e-8■□□□□ 8.4
LARP4Q71RC2 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC27.17■■□□□ 1.941e-17■□□□□ 8.4
LARP4Q71RC2 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC25.52■■□□□ 1.681e-17■□□□□ 8.4
LARP4Q71RC2 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.431e-17■□□□□ 8.4
LARP4Q71RC2 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC22.45■■□□□ 1.181e-17■□□□□ 8.4
LARP4Q71RC2 RPL7A-209ENST00000496554 947 ntTSL 216.29■□□□□ 0.21e-17■□□□□ 8.4
LARP4Q71RC2 PCYT2-217ENST00000574343 693 ntTSL 214.61□□□□□ -0.071e-17■□□□□ 8.4
LARP4Q71RC2 PCYT2-212ENST00000572995 804 ntTSL 314.43□□□□□ -0.11e-17■□□□□ 8.4
LARP4Q71RC2 RPL7A-202ENST00000323345 891 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.41e-17■□□□□ 8.4
LARP4Q71RC2 RPL7A-204ENST00000463740 1164 ntTSL 55.81□□□□□ -1.481e-17■□□□□ 8.4
Retrieved 100 of 15,922 protein–RNA pairs in 509.4 ms