RNA–Protein interactions for RNA: ENST00000550069.1

PFDN5-209, Transcript of prefoldin subunit 5, humanhuman

TSL 2

Gene PFDN5, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-209ENST00000550069 AEBP2Q6ZN18 517 aaPredicted RBP24.67■■□□□ 1.54
PFDN5-209ENST00000550069 CHIC1Q5VXU3 224 aa23.89■■□□□ 1.41
PFDN5-209ENST00000550069 PHF23Q9BUL5 403 aaPredicted RBP21.13■□□□□ 0.97
PFDN5-209ENST00000550069 SENP3Q9H4L4 574 aaPredicted RBP20.71■□□□□ 0.91
PFDN5-209ENST00000550069 FOXD1Q16676 465 aa19.38■□□□□ 0.69
PFDN5-209ENST00000550069 PLPPR3Q6T4P5 718 aa19.28■□□□□ 0.68
PFDN5-209ENST00000550069 PPP6R1Q9UPN7 881 aa18.69■□□□□ 0.58
PFDN5-209ENST00000550069 ADRA2BP18089 450 aa18.62■□□□□ 0.57
PFDN5-209ENST00000550069 PIAS4Q8N2W9 510 aaPredicted RBP18.2■□□□□ 0.5
PFDN5-209ENST00000550069 MSH5O43196 834 aa17.71■□□□□ 0.43
PFDN5-209ENST00000550069 PPP4R3CPQ6ZMV5 832 aa17.06■□□□□ 0.32
PFDN5-209ENST00000550069 MAPK8IP2Q13387 824 aaPredicted RBP16.96■□□□□ 0.31
PFDN5-209ENST00000550069 SCAF1Q9H7N4 1312 aaKnown RBP16.75■□□□□ 0.27
PFDN5-209ENST00000550069 KCNA4P22459 653 aa16.7■□□□□ 0.26
PFDN5-209ENST00000550069 DMRT2Q9Y5R5 561 aa16.58■□□□□ 0.24
PFDN5-209ENST00000550069 CNKSR2Q8WXI2 1034 aa16.52■□□□□ 0.24
PFDN5-209ENST00000550069 NCBP3Q53F19 620 aaKnown RBP16.43■□□□□ 0.22
PFDN5-209ENST00000550069 NPM3O75607 178 aaKnown RBP16.4■□□□□ 0.22
PFDN5-209ENST00000550069 POTEDQ86YR6 584 aa16.39■□□□□ 0.21
PFDN5-209ENST00000550069 RNF216Q9NWF9 866 aaPredicted RBP16.22■□□□□ 0.19
PFDN5-209ENST00000550069 HOXD11P31277 338 aaPredicted RBP16.21■□□□□ 0.19
PFDN5-209ENST00000550069 DCAF8L1A6NGE4 600 aa15.87■□□□□ 0.13
PFDN5-209ENST00000550069 SLC4A1APQ9BWU0 796 aaKnown RBP15.78■□□□□ 0.12
PFDN5-209ENST00000550069 DNAJC5BQ9UF47 199 aa15.78■□□□□ 0.12
PFDN5-209ENST00000550069 SLC4A2P04920 1241 aa15.56■□□□□ 0.08
PFDN5-209ENST00000550069 ZBTB22O15209 634 aa15.46■□□□□ 0.07
PFDN5-209ENST00000550069 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.42■□□□□ 0.064e-10■■□□□ 12.1
PFDN5-209ENST00000550069 EHMT2Q96KQ7 1210 aa15.38■□□□□ 0.05
PFDN5-209ENST00000550069 RNF39Q9H2S5 420 aa15.28■□□□□ 0.04
PFDN5-209ENST00000550069 U3KPZ7 1027 aaPredicted RBP15.27■□□□□ 0.04
PFDN5-209ENST00000550069 FOXD4L1Q9NU39 408 aa15.26■□□□□ 0.03
PFDN5-209ENST00000550069 CSRNP3Q8WYN3 585 aa15.22■□□□□ 0.03
PFDN5-209ENST00000550069 MYCNP04198 464 aaPredicted RBP15.04■□□□□ -0
PFDN5-209ENST00000550069 C1QBPQ07021 282 aaKnown RBP14.99□□□□□ -0.01
PFDN5-209ENST00000550069 SPINK5Q9NQ38 1064 aaPredicted RBP14.9□□□□□ -0.02
PFDN5-209ENST00000550069 CACNB1Q02641 598 aaPredicted RBP14.88□□□□□ -0.03
PFDN5-209ENST00000550069 ATF5Q9Y2D1 282 aaPredicted RBP14.86□□□□□ -0.03
PFDN5-209ENST00000550069 SAMD1Q6SPF0 538 aaPredicted RBP14.82□□□□□ -0.04
PFDN5-209ENST00000550069 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.8□□□□□ -0.04
PFDN5-209ENST00000550069 HNRNPUL2Q1KMD3 747 aaKnown RBP14.8□□□□□ -0.04
PFDN5-209ENST00000550069 CAPN15O75808 1086 aa14.73□□□□□ -0.05
PFDN5-209ENST00000550069 TRHP20396 242 aaPredicted RBP14.67□□□□□ -0.06
PFDN5-209ENST00000550069 ATXN8OSP0DMR3 200 aa14.63□□□□□ -0.07
PFDN5-209ENST00000550069 APLP2Q06481 763 aa14.6□□□□□ -0.07
PFDN5-209ENST00000550069 ABCB7O75027 752 aa14.55□□□□□ -0.08
PFDN5-209ENST00000550069 ZNF219Q9P2Y4 722 aaPredicted RBP14.55□□□□□ -0.08
PFDN5-209ENST00000550069 DSG3P32926 999 aa14.54□□□□□ -0.08
PFDN5-209ENST00000550069 POLA2Q14181 598 aa14.42□□□□□ -0.1
PFDN5-209ENST00000550069 MKRN4PQ13434 485 aaPredicted RBP14.18□□□□□ -0.14
PFDN5-209ENST00000550069 OSCARQ8IYS5 282 aa13.99□□□□□ -0.17
PFDN5-209ENST00000550069 ZBTB12Q9Y330 459 aaPredicted RBP13.99□□□□□ -0.17
PFDN5-209ENST00000550069 FBLN2P98095 1184 aa13.97□□□□□ -0.17
PFDN5-209ENST00000550069 FKBP8Q14318 412 aa13.72□□□□□ -0.21
PFDN5-209ENST00000550069 SPDYE4A6NLX3 237 aa13.71□□□□□ -0.21
PFDN5-209ENST00000550069 SPDYE2BA6NHP3 402 aa13.7□□□□□ -0.22
PFDN5-209ENST00000550069 SPDYE6P0CI01 402 aa13.7□□□□□ -0.22
PFDN5-209ENST00000550069 SPDYE2Q495Y8 402 aa13.7□□□□□ -0.22
PFDN5-209ENST00000550069 RBM42Q9BTD8 480 aaKnown RBP13.68□□□□□ -0.22
PFDN5-209ENST00000550069 ZNF692Q9BU19 519 aaPredicted RBP13.67□□□□□ -0.22
PFDN5-209ENST00000550069 SSUH2Q9Y2M2 353 aa13.67□□□□□ -0.22
PFDN5-209ENST00000550069 AKT1S1Q96B36 256 aa13.56□□□□□ -0.24
PFDN5-209ENST00000550069 PABPN1Q86U42 306 aaKnown RBP eCLIP13.54□□□□□ -0.24
PFDN5-209ENST00000550069 REM2Q8IYK8 340 aaPredicted RBP13.52□□□□□ -0.25
PFDN5-209ENST00000550069 PROM2Q8N271 834 aa13.5□□□□□ -0.25
PFDN5-209ENST00000550069 PITPNM1O00562 1244 aa13.41□□□□□ -0.26
PFDN5-209ENST00000550069 CLEC11AQ9Y240 323 aa13.32□□□□□ -0.28
PFDN5-209ENST00000550069 SPDYE1Q8NFV5 336 aaPredicted RBP13.29□□□□□ -0.28
PFDN5-209ENST00000550069 CHRDL2Q6WN34 429 aa13.26□□□□□ -0.29
PFDN5-209ENST00000550069 PRR29P0C7W0 189 aa13.14□□□□□ -0.31
PFDN5-209ENST00000550069 PIP4P2Q8N4L2 257 aa13.14□□□□□ -0.31
PFDN5-209ENST00000550069 STAG3Q9UJ98 1225 aa13.13□□□□□ -0.31
PFDN5-209ENST00000550069 FXR2P51116 673 aaKnown RBP eCLIP13.12□□□□□ -0.31
PFDN5-209ENST00000550069 CHADLQ6NUI6 762 aa13.11□□□□□ -0.31
PFDN5-209ENST00000550069 CREBZFQ9NS37 354 aa13.07□□□□□ -0.32
PFDN5-209ENST00000550069 FBXO3Q9UK99 471 aa13.05□□□□□ -0.32
PFDN5-209ENST00000550069 VASPP50552 380 aaPredicted RBP13.04□□□□□ -0.32
PFDN5-209ENST00000550069 PRKAR2AP13861 404 aaKnown RBP13.03□□□□□ -0.32
PFDN5-209ENST00000550069 MNX1P50219 401 aaPredicted RBP12.96□□□□□ -0.33
PFDN5-209ENST00000550069 MIER1Q8N108 512 aa12.96□□□□□ -0.33
PFDN5-209ENST00000550069 PLCD3Q8N3E9 789 aa12.93□□□□□ -0.34
PFDN5-209ENST00000550069 POTEHQ6S545 545 aa12.92□□□□□ -0.34
PFDN5-209ENST00000550069 IFNLR1Q8IU57 520 aaPredicted RBP12.92□□□□□ -0.34
PFDN5-209ENST00000550069 FARP1Q9Y4F1 1045 aaPredicted RBP12.88□□□□□ -0.35
PFDN5-209ENST00000550069 NISCHQ9Y2I1 1504 aa12.78□□□□□ -0.36
PFDN5-209ENST00000550069 KLHL34Q8N239 644 aa12.76□□□□□ -0.37
PFDN5-209ENST00000550069 EVX2Q03828 476 aa12.74□□□□□ -0.37
PFDN5-209ENST00000550069 PLEKHG5O94827 1062 aa12.73□□□□□ -0.37
PFDN5-209ENST00000550069 NUBP1P53384 320 aa12.72□□□□□ -0.37
PFDN5-209ENST00000550069 RASEFQ8IZ41 740 aa12.72□□□□□ -0.37
PFDN5-209ENST00000550069 C19orf67A6NJJ6 358 aa12.67□□□□□ -0.38
PFDN5-209ENST00000550069 HAX1O00165 279 aa12.66□□□□□ -0.38
PFDN5-209ENST00000550069 SPOCK2Q92563 424 aa12.66□□□□□ -0.38
PFDN5-209ENST00000550069 ZBTB47Q9UFB7 747 aaPredicted RBP12.66□□□□□ -0.38
PFDN5-209ENST00000550069 NPM1P06748 294 aaKnown RBP eCLIP12.65□□□□□ -0.38
PFDN5-209ENST00000550069 CD44P16070 742 aaKnown RBP12.64□□□□□ -0.39
PFDN5-209ENST00000550069 TSPYL2Q9H2G4 693 aaPredicted RBP12.61□□□□□ -0.39
PFDN5-209ENST00000550069 ZRANB1Q9UGI0 708 aa12.56□□□□□ -0.4
PFDN5-209ENST00000550069 PHF12Q96QT6 1004 aa12.53□□□□□ -0.4
PFDN5-209ENST00000550069 CCDC61Q9Y6R9 512 aa12.53□□□□□ -0.4
PFDN5-209ENST00000550069 DCAF8Q5TAQ9 597 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms