RNA–Protein interactions for RNA: ENST00000401089.3

SZRD1-202, Transcript of SUZ RNA binding domain containing 1, humanhuman

TSL 2 BASIC

Gene SZRD1, Length 3,447 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SZRD1-202ENST00000401089 NISCHQ9Y2I1 1504 aa20.8■□□□□ 0.92
SZRD1-202ENST00000401089 CCDC180Q9P1Z9 1646 aa18.22■□□□□ 0.51
SZRD1-202ENST00000401089 ABCC9O60706 1549 aa17.89■□□□□ 0.45
SZRD1-202ENST00000401089 DCAF8L2P0C7V8 631 aa17.7■□□□□ 0.42
SZRD1-202ENST00000401089 ZCCHC6Q5VYS8 1495 aaKnown RBP17.35■□□□□ 0.37
SZRD1-202ENST00000401089 NACADO15069 1562 aa17.13■□□□□ 0.33
SZRD1-202ENST00000401089 RB1CC1Q8TDY2 1594 aa17.13■□□□□ 0.33
SZRD1-202ENST00000401089 SHROOM4Q9ULL8 1493 aa17.11■□□□□ 0.33
SZRD1-202ENST00000401089 DCAF1Q9Y4B6 1507 aa17.06■□□□□ 0.32
SZRD1-202ENST00000401089 MYO15BQ96JP2 1530 aa17■□□□□ 0.31
SZRD1-202ENST00000401089 SCRIBQ14160 1630 aa16.9■□□□□ 0.3
SZRD1-202ENST00000401089 PABPN1Q86U42 306 aaKnown RBP eCLIP16.88■□□□□ 0.29
SZRD1-202ENST00000401089 SUPT5HO00267 1087 aaKnown RBP16.75■□□□□ 0.27
SZRD1-202ENST00000401089 UNC13AQ9UPW8 1703 aa16.73■□□□□ 0.27
SZRD1-202ENST00000401089 BICRAQ9NZM4 1560 aa16.6■□□□□ 0.25
SZRD1-202ENST00000401089 CECR2Q9BXF3 1484 aa16.29■□□□□ 0.2
SZRD1-202ENST00000401089 DNAJC5BQ9UF47 199 aa16.21■□□□□ 0.19
SZRD1-202ENST00000401089 EIF4G1Q04637 1599 aaKnown RBP16.18■□□□□ 0.18
SZRD1-202ENST00000401089 MROH2BQ7Z745 1585 aa16.1■□□□□ 0.17
SZRD1-202ENST00000401089 BAZ1AQ9NRL2 1556 aaPredicted RBP16.09■□□□□ 0.17
SZRD1-202ENST00000401089 SMARCA4P51532 1647 aa16.07■□□□□ 0.16
SZRD1-202ENST00000401089 CC2D2AQ9P2K1 1620 aa16.07■□□□□ 0.16
SZRD1-202ENST00000401089 RSF1Q96T23 1441 aaPredicted RBP16.01■□□□□ 0.15
SZRD1-202ENST00000401089 WIZO95785 1651 aa15.95■□□□□ 0.14
SZRD1-202ENST00000401089 ATAD2BQ9ULI0 1458 aa15.95■□□□□ 0.14
SZRD1-202ENST00000401089 CHIC1Q5VXU3 224 aa15.92■□□□□ 0.14
SZRD1-202ENST00000401089 SMARCA2P51531 1590 aa15.89■□□□□ 0.13
SZRD1-202ENST00000401089 BAZ1BQ9UIG0 1483 aaKnown RBP15.87■□□□□ 0.13
SZRD1-202ENST00000401089 NCAPD3P42695 1498 aa15.84■□□□□ 0.13
SZRD1-202ENST00000401089 PEG3Q9GZU2 1588 aa15.79■□□□□ 0.12
SZRD1-202ENST00000401089 HMGXB3Q12766 1538 aa15.74■□□□□ 0.11
SZRD1-202ENST00000401089 TOP2AP11388 1531 aaKnown RBP15.71■□□□□ 0.1
SZRD1-202ENST00000401089 EHMT2Q96KQ7 1210 aa15.7■□□□□ 0.1
SZRD1-202ENST00000401089 LOC105371045A0A1W2PR82 267 aa15.68■□□□□ 0.1
SZRD1-202ENST00000401089 CCDC88BA6NC98 1476 aa15.61■□□□□ 0.09
SZRD1-202ENST00000401089 FAM9AQ8IZU1 332 aaPredicted RBP15.59■□□□□ 0.09
SZRD1-202ENST00000401089 PCGF6Q9BYE7 350 aa15.58■□□□□ 0.08
SZRD1-202ENST00000401089 NESP48681 1621 aa15.54■□□□□ 0.08
SZRD1-202ENST00000401089 CADPSQ9ULU8 1353 aa15.48■□□□□ 0.07
SZRD1-202ENST00000401089 TRIM41Q8WV44 630 aa15.45■□□□□ 0.06
SZRD1-202ENST00000401089 PELP1Q8IZL8 1130 aaKnown RBP15.4■□□□□ 0.06
SZRD1-202ENST00000401089 ERCC6Q03468 1493 aa15.39■□□□□ 0.05
SZRD1-202ENST00000401089 CFTRP13569 1480 aa15.39■□□□□ 0.05
SZRD1-202ENST00000401089 LAMC3Q9Y6N6 1575 aa15.36■□□□□ 0.05
SZRD1-202ENST00000401089 PDS5BQ9NTI5 1447 aa15.34■□□□□ 0.05
SZRD1-202ENST00000401089 FANCD2Q9BXW9 1451 aa15.32■□□□□ 0.04
SZRD1-202ENST00000401089 KIF21AQ7Z4S6 1674 aa15.26■□□□□ 0.03
SZRD1-202ENST00000401089 CEP164Q9UPV0 1460 aa15.26■□□□□ 0.03
SZRD1-202ENST00000401089 PPARGC1BQ86YN6 1023 aaKnown RBP15.23■□□□□ 0.03
SZRD1-202ENST00000401089 HRCP23327 699 aa15.23■□□□□ 0.03
SZRD1-202ENST00000401089 ABCC8Q09428 1581 aa15.2■□□□□ 0.02
SZRD1-202ENST00000401089 PRDM2Q13029 1718 aa15.17■□□□□ 0.02
SZRD1-202ENST00000401089 MRC2Q9UBG0 1479 aa15.14■□□□□ 0.01
SZRD1-202ENST00000401089 URB2Q14146 1524 aaKnown RBP15.13■□□□□ 0.01
SZRD1-202ENST00000401089 WRNQ14191 1432 aaPredicted RBP eCLIP15.12■□□□□ 0.019e-6■■■■■ 50.1
SZRD1-202ENST00000401089 TTBK1Q5TCY1 1321 aaPredicted RBP15.11■□□□□ 0.01
SZRD1-202ENST00000401089 THOC2Q8NI27 1593 aaKnown RBP15.07■□□□□ 0
SZRD1-202ENST00000401089 TOPBP1Q92547 1522 aa15.07■□□□□ 0
SZRD1-202ENST00000401089 CUX1P39880 1505 aa15.07■□□□□ 0
SZRD1-202ENST00000401089 MYT1Q01538 1121 aa15.05■□□□□ 0
SZRD1-202ENST00000401089 TRIM26Q12899 539 aaPredicted RBP15.04■□□□□ -0
SZRD1-202ENST00000401089 SYNJ1O43426 1573 aa15.03■□□□□ -0
SZRD1-202ENST00000401089 DNMBPQ6XZF7 1577 aa15.03■□□□□ -0
SZRD1-202ENST00000401089 WDR62O43379 1518 aa15.02■□□□□ -0
SZRD1-202ENST00000401089 FGD5Q6ZNL6 1462 aa15□□□□□ -0.01
SZRD1-202ENST00000401089 RAD54L2Q9Y4B4 1467 aa15□□□□□ -0.01
SZRD1-202ENST00000401089 POLA1P09884 1462 aaPredicted RBP14.98□□□□□ -0.01
SZRD1-202ENST00000401089 SOGA1O94964 1423 aa14.98□□□□□ -0.01
SZRD1-202ENST00000401089 TOP2BQ02880 1626 aa14.95□□□□□ -0.02
SZRD1-202ENST00000401089 CUX2O14529 1486 aa14.94□□□□□ -0.02
SZRD1-202ENST00000401089 TDRD9Q8NDG6 1382 aaKnown RBP14.94□□□□□ -0.02
SZRD1-202ENST00000401089 BIVM-ERCC5R4GMW8 1640 aa14.9□□□□□ -0.02
SZRD1-202ENST00000401089 ZNF608Q9ULD9 1512 aaPredicted RBP14.89□□□□□ -0.03
SZRD1-202ENST00000401089 AQRO60306 1485 aaKnown RBP eCLIP14.88□□□□□ -0.036e-7■■■□□ 18.8
SZRD1-202ENST00000401089 IFT140Q96RY7 1462 aa14.88□□□□□ -0.03
SZRD1-202ENST00000401089 RANGAP1P46060 587 aaPredicted RBP14.88□□□□□ -0.03
SZRD1-202ENST00000401089 UBTFP17480 764 aaKnown RBP14.84□□□□□ -0.03
SZRD1-202ENST00000401089 FBLN2P98095 1184 aa14.83□□□□□ -0.04
SZRD1-202ENST00000401089 TARBP1Q13395 1621 aaKnown RBP14.82□□□□□ -0.04
SZRD1-202ENST00000401089 RUSC2Q8N2Y8 1516 aa14.81□□□□□ -0.04
SZRD1-202ENST00000401089 ABCA10Q8WWZ4 1543 aa14.79□□□□□ -0.04
SZRD1-202ENST00000401089 GAPVD1Q14C86 1478 aa14.78□□□□□ -0.04
SZRD1-202ENST00000401089 KIF27Q86VH2 1401 aa14.77□□□□□ -0.04
SZRD1-202ENST00000401089 EIF4G3O43432 1585 aaKnown RBP14.76□□□□□ -0.05
SZRD1-202ENST00000401089 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.73□□□□□ -0.05
SZRD1-202ENST00000401089 CHMP7Q8WUX9 453 aaPredicted RBP14.71□□□□□ -0.05
SZRD1-202ENST00000401089 WDR97A6NE52 1622 aa14.71□□□□□ -0.06
SZRD1-202ENST00000401089 GRIN2BQ13224 1484 aa14.7□□□□□ -0.06
SZRD1-202ENST00000401089 CSRNP3Q8WYN3 585 aa14.7□□□□□ -0.06
SZRD1-202ENST00000401089 SNAPC4Q5SXM2 1469 aa14.69□□□□□ -0.06
SZRD1-202ENST00000401089 IGF1RP08069 1367 aa14.68□□□□□ -0.06
SZRD1-202ENST00000401089 ABCA5Q8WWZ7 1642 aa14.67□□□□□ -0.06
SZRD1-202ENST00000401089 CCER1Q8TC90 406 aaPredicted RBP14.65□□□□□ -0.06
SZRD1-202ENST00000401089 PBRM1Q86U86 1689 aa14.64□□□□□ -0.07
SZRD1-202ENST00000401089 CARMIL1Q5VZK9 1371 aa14.63□□□□□ -0.07
SZRD1-202ENST00000401089 ERICH3Q5RHP9 1530 aa14.6□□□□□ -0.07
SZRD1-202ENST00000401089 MAGI1Q96QZ7 1491 aaPredicted RBP14.59□□□□□ -0.07
SZRD1-202ENST00000401089 EEA1Q15075 1411 aa14.58□□□□□ -0.08
SZRD1-202ENST00000401089 FHAD1B1AJZ9 1412 aa14.58□□□□□ -0.08
SZRD1-202ENST00000401089 ZEB1P37275 1124 aaPredicted RBP14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 134.8 ms