RNA–Protein interactions for RNA: ENST00000530262.5

MACF1-229, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 5

Gene MACF1, Length 6,257 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-229ENST00000530262 NISCHQ9Y2I1 1504 aa12.98□□□□□ -0.33
MACF1-229ENST00000530262 DCAF8L2P0C7V8 631 aa12.92□□□□□ -0.34
MACF1-229ENST00000530262 SHROOM4Q9ULL8 1493 aa12.07□□□□□ -0.48
MACF1-229ENST00000530262 SUPT5HO00267 1087 aaKnown RBP11.93□□□□□ -0.5
MACF1-229ENST00000530262 PELP1Q8IZL8 1130 aaKnown RBP11.57□□□□□ -0.56
MACF1-229ENST00000530262 EHMT2Q96KQ7 1210 aa11.54□□□□□ -0.56
MACF1-229ENST00000530262 ABCC9O60706 1549 aa11.46□□□□□ -0.58
MACF1-229ENST00000530262 APLP2Q06481 763 aa11.38□□□□□ -0.59
MACF1-229ENST00000530262 FAM9AQ8IZU1 332 aaPredicted RBP11.25□□□□□ -0.61
MACF1-229ENST00000530262 PABPN1Q86U42 306 aaKnown RBP eCLIP11.23□□□□□ -0.61
MACF1-229ENST00000530262 ZEB1P37275 1124 aaPredicted RBP11.15□□□□□ -0.62
MACF1-229ENST00000530262 RANGAP1P46060 587 aaPredicted RBP11.13□□□□□ -0.63
MACF1-229ENST00000530262 CENPBP07199 599 aaPredicted RBP11.09□□□□□ -0.63
MACF1-229ENST00000530262 PCGF6Q9BYE7 350 aa11.09□□□□□ -0.63
MACF1-229ENST00000530262 CCER1Q8TC90 406 aaPredicted RBP11.04□□□□□ -0.64
MACF1-229ENST00000530262 TTBK1Q5TCY1 1321 aaPredicted RBP11.04□□□□□ -0.64
MACF1-229ENST00000530262 TRIM41Q8WV44 630 aa11.03□□□□□ -0.64
MACF1-229ENST00000530262 ERICH6Q7L0X2 663 aa11.01□□□□□ -0.65
MACF1-229ENST00000530262 ATP1B4Q9UN42 357 aaPredicted RBP10.94□□□□□ -0.66
MACF1-229ENST00000530262 UBTFP17480 764 aaKnown RBP10.87□□□□□ -0.67
MACF1-229ENST00000530262 CCDC180Q9P1Z9 1646 aa10.86□□□□□ -0.67
MACF1-229ENST00000530262 MYT1Q01538 1121 aa10.85□□□□□ -0.67
MACF1-229ENST00000530262 SCRIBQ14160 1630 aa10.85□□□□□ -0.67
MACF1-229ENST00000530262 NEFLP07196 543 aa10.84□□□□□ -0.67
MACF1-229ENST00000530262 ZCCHC6Q5VYS8 1495 aaKnown RBP10.73□□□□□ -0.69
MACF1-229ENST00000530262 TRIM26Q12899 539 aaPredicted RBP10.73□□□□□ -0.69
MACF1-229ENST00000530262 YTHDC1Q96MU7 727 aaKnown RBP10.69□□□□□ -0.7
MACF1-229ENST00000530262 PPARGC1BQ86YN6 1023 aaKnown RBP10.68□□□□□ -0.7
MACF1-229ENST00000530262 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.65□□□□□ -0.7
MACF1-229ENST00000530262 HNRNPUL2Q1KMD3 747 aaKnown RBP10.65□□□□□ -0.7
MACF1-229ENST00000530262 RB1CC1Q8TDY2 1594 aa10.65□□□□□ -0.71
MACF1-229ENST00000530262 FBLN2P98095 1184 aa10.6□□□□□ -0.71
MACF1-229ENST00000530262 HRCP23327 699 aa10.59□□□□□ -0.71
MACF1-229ENST00000530262 LOC105371045A0A1W2PR82 267 aa10.58□□□□□ -0.72
MACF1-229ENST00000530262 CHIC1Q5VXU3 224 aa10.58□□□□□ -0.72
MACF1-229ENST00000530262 MYT1LQ9UL68 1186 aa10.55□□□□□ -0.72
MACF1-229ENST00000530262 DAXXQ9UER7 740 aaPredicted RBP10.54□□□□□ -0.72
MACF1-229ENST00000530262 NACADO15069 1562 aa10.51□□□□□ -0.73
MACF1-229ENST00000530262 ITGAEP38570 1179 aa10.49□□□□□ -0.73
MACF1-229ENST00000530262 POLR3GLQ9BT43 218 aa10.43□□□□□ -0.74
MACF1-229ENST00000530262 ARID3CA6NKF2 412 aa10.39□□□□□ -0.75
MACF1-229ENST00000530262 P3H3Q8IVL6 736 aa10.37□□□□□ -0.75
MACF1-229ENST00000530262 DIEXFQ68CQ4 756 aaKnown RBP10.34□□□□□ -0.75
MACF1-229ENST00000530262 RTL5Q5HYW3 569 aaPredicted RBP10.3□□□□□ -0.76
MACF1-229ENST00000530262 ZNF316A6NFI3 1004 aaPredicted RBP10.3□□□□□ -0.76
MACF1-229ENST00000530262 BAZ1BQ9UIG0 1483 aaKnown RBP10.29□□□□□ -0.76
MACF1-229ENST00000530262 FAM50AQ14320 339 aaKnown RBP10.27□□□□□ -0.77
MACF1-229ENST00000530262 CECR2Q9BXF3 1484 aa10.27□□□□□ -0.77
MACF1-229ENST00000530262 RSF1Q96T23 1441 aaPredicted RBP10.26□□□□□ -0.77
MACF1-229ENST00000530262 SLC4A1APQ9BWU0 796 aaKnown RBP10.25□□□□□ -0.77
MACF1-229ENST00000530262 CLSPNQ9HAW4 1339 aa10.25□□□□□ -0.77
MACF1-229ENST00000530262 CNGB1Q14028 1251 aaPredicted RBP10.24□□□□□ -0.77
MACF1-229ENST00000530262 CSRNP3Q8WYN3 585 aa10.24□□□□□ -0.77
MACF1-229ENST00000530262 TRIM52Q96A61 297 aa10.23□□□□□ -0.77
MACF1-229ENST00000530262 DCAF1Q9Y4B6 1507 aa10.22□□□□□ -0.77
MACF1-229ENST00000530262 ERCC6Q03468 1493 aa10.22□□□□□ -0.77
MACF1-229ENST00000530262 ANP32CO43423 234 aa10.19□□□□□ -0.78
MACF1-229ENST00000530262 CHMP7Q8WUX9 453 aaPredicted RBP10.18□□□□□ -0.78
MACF1-229ENST00000530262 BAZ1AQ9NRL2 1556 aaPredicted RBP10.17□□□□□ -0.78
MACF1-229ENST00000530262 NEUROD1Q13562 356 aa10.17□□□□□ -0.78
MACF1-229ENST00000530262 ZNF777Q9ULD5 760 aaPredicted RBP10.15□□□□□ -0.79
MACF1-229ENST00000530262 CDK11AQ9UQ88 783 aaPredicted RBP10.14□□□□□ -0.79
MACF1-229ENST00000530262 MROH2BQ7Z745 1585 aa10.11□□□□□ -0.79
MACF1-229ENST00000530262 GTF3C3Q9Y5Q9 886 aa10.1□□□□□ -0.79
MACF1-229ENST00000530262 ZBTB47Q9UFB7 747 aaPredicted RBP10.1□□□□□ -0.79
MACF1-229ENST00000530262 PLPPR3Q6T4P5 718 aa10.09□□□□□ -0.79
MACF1-229ENST00000530262 NPM1P06748 294 aaKnown RBP eCLIP10.09□□□□□ -0.79
MACF1-229ENST00000530262 BCANQ96GW7 911 aa10.06□□□□□ -0.8
MACF1-229ENST00000530262 ZNF326Q5BKZ1 582 aaKnown RBP10.06□□□□□ -0.8
MACF1-229ENST00000530262 WRNQ14191 1432 aaPredicted RBP eCLIP10.05□□□□□ -0.8
MACF1-229ENST00000530262 CANXP27824 592 aaKnown RBP10.03□□□□□ -0.8
MACF1-229ENST00000530262 NEFMP07197 916 aa10.02□□□□□ -0.81
MACF1-229ENST00000530262 SMARCA2P51531 1590 aa10.01□□□□□ -0.81
MACF1-229ENST00000530262 WIZO95785 1651 aa10.01□□□□□ -0.81
MACF1-229ENST00000530262 ACIN1Q9UKV3 1341 aaKnown RBP10□□□□□ -0.81
MACF1-229ENST00000530262 MYO15BQ96JP2 1530 aa10□□□□□ -0.81
MACF1-229ENST00000530262 CCDC88BA6NC98 1476 aa9.99□□□□□ -0.81
MACF1-229ENST00000530262 ANP32AP39687 249 aaKnown RBP9.98□□□□□ -0.81
MACF1-229ENST00000530262 KCNH8Q96L42 1107 aa9.98□□□□□ -0.81
MACF1-229ENST00000530262 ESF1Q9H501 851 aaKnown RBP9.94□□□□□ -0.82
MACF1-229ENST00000530262 KIF27Q86VH2 1401 aa9.93□□□□□ -0.82
MACF1-229ENST00000530262 PDS5BQ9NTI5 1447 aa9.93□□□□□ -0.82
MACF1-229ENST00000530262 ATAD2BQ9ULI0 1458 aa9.93□□□□□ -0.82
MACF1-229ENST00000530262 CHIC2Q9UKJ5 165 aa9.93□□□□□ -0.82
MACF1-229ENST00000530262 ABCC8Q09428 1581 aa9.92□□□□□ -0.82
MACF1-229ENST00000530262 SMARCA4P51532 1647 aa9.92□□□□□ -0.82
MACF1-229ENST00000530262 TONSLQ96HA7 1378 aa9.91□□□□□ -0.82
MACF1-229ENST00000530262 CUX2O14529 1486 aa9.91□□□□□ -0.82
MACF1-229ENST00000530262 EIF4G1Q04637 1599 aaKnown RBP9.9□□□□□ -0.82
MACF1-229ENST00000530262 TDRD9Q8NDG6 1382 aaKnown RBP9.89□□□□□ -0.83
MACF1-229ENST00000530262 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.89□□□□□ -0.831e-6■■■□□ 16
MACF1-229ENST00000530262 TOP2AP11388 1531 aaKnown RBP9.89□□□□□ -0.83
MACF1-229ENST00000530262 CLIP1P30622 1438 aa9.88□□□□□ -0.83
MACF1-229ENST00000530262 SLC24A1O60721 1099 aa9.88□□□□□ -0.83
MACF1-229ENST00000530262 CHGAP10645 457 aaKnown RBP9.88□□□□□ -0.83
MACF1-229ENST00000530262 MTUS2Q5JR59 1369 aa9.88□□□□□ -0.83
MACF1-229ENST00000530262 CADPSQ9ULU8 1353 aa9.87□□□□□ -0.83
MACF1-229ENST00000530262 TRHP20396 242 aaPredicted RBP9.86□□□□□ -0.83
MACF1-229ENST00000530262 SOGA1O94964 1423 aa9.86□□□□□ -0.83
MACF1-229ENST00000530262 GOLGA3Q08378 1498 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms