Protein–RNA interactions for Protein: Q4VXA5

KHDC1, KH homology domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC1Q4VXA5 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC17.34■□□□□ 0.37
KHDC1Q4VXA5 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC17.34■□□□□ 0.37
KHDC1Q4VXA5 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
KHDC1Q4VXA5 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
KHDC1Q4VXA5 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
KHDC1Q4VXA5 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
KHDC1Q4VXA5 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
KHDC1Q4VXA5 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC17.34■□□□□ 0.37
KHDC1Q4VXA5 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
KHDC1Q4VXA5 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC17.34■□□□□ 0.37
KHDC1Q4VXA5 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC17.34■□□□□ 0.37
KHDC1Q4VXA5 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC17.34■□□□□ 0.37
KHDC1Q4VXA5 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
KHDC1Q4VXA5 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
KHDC1Q4VXA5 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
KHDC1Q4VXA5 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
KHDC1Q4VXA5 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC17.34■□□□□ 0.37
KHDC1Q4VXA5 HLA-J-201ENST00000462773 1622 ntBASIC17.34■□□□□ 0.37
KHDC1Q4VXA5 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
KHDC1Q4VXA5 SART3-203ENST00000546611 1184 ntBASIC17.34■□□□□ 0.37
KHDC1Q4VXA5 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC17.34■□□□□ 0.37
KHDC1Q4VXA5 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC17.34■□□□□ 0.37
KHDC1Q4VXA5 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
KHDC1Q4VXA5 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
KHDC1Q4VXA5 AL121912.1-201ENST00000603683 238 ntBASIC17.34■□□□□ 0.37
KHDC1Q4VXA5 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
KHDC1Q4VXA5 FRMD6-AS1-201ENST00000617151 2229 ntBASIC17.34■□□□□ 0.37
KHDC1Q4VXA5 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
KHDC1Q4VXA5 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC17.34■□□□□ 0.37
KHDC1Q4VXA5 LINC01451-201ENST00000623792 534 ntBASIC17.34■□□□□ 0.37
KHDC1Q4VXA5 AC148477.5-201ENST00000625164 1645 ntBASIC17.34■□□□□ 0.37
KHDC1Q4VXA5 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
KHDC1Q4VXA5 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
KHDC1Q4VXA5 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
KHDC1Q4VXA5 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC17.33■□□□□ 0.37
KHDC1Q4VXA5 MST1L-201ENST00000442552 2185 ntBASIC17.33■□□□□ 0.37
KHDC1Q4VXA5 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
KHDC1Q4VXA5 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC17.33■□□□□ 0.37
KHDC1Q4VXA5 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC17.33■□□□□ 0.37
KHDC1Q4VXA5 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC17.33■□□□□ 0.37
KHDC1Q4VXA5 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC17.33■□□□□ 0.37
KHDC1Q4VXA5 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
KHDC1Q4VXA5 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC17.33■□□□□ 0.37
KHDC1Q4VXA5 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
KHDC1Q4VXA5 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC17.33■□□□□ 0.36
KHDC1Q4VXA5 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
KHDC1Q4VXA5 PAN3-AS1-201ENST00000563843 1351 ntBASIC17.33■□□□□ 0.36
KHDC1Q4VXA5 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
KHDC1Q4VXA5 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
KHDC1Q4VXA5 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
KHDC1Q4VXA5 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
KHDC1Q4VXA5 TLE1-202ENST00000376484 666 ntTSL 3 BASIC17.33■□□□□ 0.36
KHDC1Q4VXA5 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC17.33■□□□□ 0.36
KHDC1Q4VXA5 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
KHDC1Q4VXA5 TPM4P1-201ENST00000436100 807 ntBASIC17.33■□□□□ 0.36
KHDC1Q4VXA5 NKTR-203ENST00000442970 646 ntTSL 2 BASIC17.33■□□□□ 0.36
KHDC1Q4VXA5 SRP19-202ENST00000445150 833 ntTSL 2 BASIC17.33■□□□□ 0.36
KHDC1Q4VXA5 FAAHP1-202ENST00000446499 1238 ntBASIC17.33■□□□□ 0.36
KHDC1Q4VXA5 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC17.33■□□□□ 0.36
KHDC1Q4VXA5 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC17.33■□□□□ 0.36
KHDC1Q4VXA5 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC17.33■□□□□ 0.36
KHDC1Q4VXA5 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC17.33■□□□□ 0.36
KHDC1Q4VXA5 STK25P1-201ENST00000585406 838 ntBASIC17.33■□□□□ 0.36
KHDC1Q4VXA5 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
KHDC1Q4VXA5 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
KHDC1Q4VXA5 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
KHDC1Q4VXA5 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
KHDC1Q4VXA5 PCDHB17P-201ENST00000539533 2393 ntBASIC17.33■□□□□ 0.36
KHDC1Q4VXA5 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC17.33■□□□□ 0.36
KHDC1Q4VXA5 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
KHDC1Q4VXA5 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
KHDC1Q4VXA5 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
KHDC1Q4VXA5 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
KHDC1Q4VXA5 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
KHDC1Q4VXA5 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
KHDC1Q4VXA5 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
KHDC1Q4VXA5 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
KHDC1Q4VXA5 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
KHDC1Q4VXA5 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
KHDC1Q4VXA5 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
KHDC1Q4VXA5 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
KHDC1Q4VXA5 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
KHDC1Q4VXA5 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
KHDC1Q4VXA5 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
KHDC1Q4VXA5 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
KHDC1Q4VXA5 SPDYE21P-201ENST00000413323 827 ntBASIC17.32■□□□□ 0.36
KHDC1Q4VXA5 AC009078.2-202ENST00000463353 338 ntBASIC17.32■□□□□ 0.36
KHDC1Q4VXA5 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC17.32■□□□□ 0.36
KHDC1Q4VXA5 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC17.32■□□□□ 0.36
KHDC1Q4VXA5 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC17.32■□□□□ 0.36
KHDC1Q4VXA5 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
KHDC1Q4VXA5 VPS51-217ENST00000639871 243 ntTSL 5 BASIC17.32■□□□□ 0.36
KHDC1Q4VXA5 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
KHDC1Q4VXA5 AMT-250ENST00000637682 1823 ntTSL 5 BASIC17.32■□□□□ 0.36
KHDC1Q4VXA5 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
KHDC1Q4VXA5 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
KHDC1Q4VXA5 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
KHDC1Q4VXA5 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
KHDC1Q4VXA5 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
KHDC1Q4VXA5 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms