Protein–RNA interactions for Protein: P62306

SNRPF, Small nuclear ribonucleoprotein F, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPFP62306 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
SNRPFP62306 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
SNRPFP62306 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
SNRPFP62306 AC006277.1-201ENST00000624348 1610 ntBASIC18.52■□□□□ 0.55
SNRPFP62306 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
SNRPFP62306 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
SNRPFP62306 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
SNRPFP62306 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
SNRPFP62306 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
SNRPFP62306 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
SNRPFP62306 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SNRPFP62306 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SNRPFP62306 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SNRPFP62306 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC18.51■□□□□ 0.55
SNRPFP62306 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SNRPFP62306 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
SNRPFP62306 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC18.51■□□□□ 0.55
SNRPFP62306 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SNRPFP62306 AC009947.1-201ENST00000444350 727 ntBASIC18.51■□□□□ 0.55
SNRPFP62306 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
SNRPFP62306 AC108751.1-201ENST00000490852 363 ntBASIC18.51■□□□□ 0.55
SNRPFP62306 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
SNRPFP62306 AC079776.4-201ENST00000511039 504 ntBASIC18.51■□□□□ 0.55
SNRPFP62306 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC18.51■□□□□ 0.55
SNRPFP62306 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC18.51■□□□□ 0.55
SNRPFP62306 AC145285.3-201ENST00000564603 959 ntBASIC18.51■□□□□ 0.55
SNRPFP62306 TCAP-202ENST00000578283 583 ntTSL 5 BASIC18.51■□□□□ 0.55
SNRPFP62306 MIR4492-201ENST00000581627 80 ntBASIC18.51■□□□□ 0.55
SNRPFP62306 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC18.51■□□□□ 0.55
SNRPFP62306 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SNRPFP62306 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SNRPFP62306 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SNRPFP62306 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
SNRPFP62306 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC18.51■□□□□ 0.55
SNRPFP62306 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
SNRPFP62306 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SNRPFP62306 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC18.51■□□□□ 0.55
SNRPFP62306 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SNRPFP62306 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SNRPFP62306 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SNRPFP62306 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
SNRPFP62306 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC18.5■□□□□ 0.55
SNRPFP62306 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC18.5■□□□□ 0.55
SNRPFP62306 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SNRPFP62306 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
SNRPFP62306 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SNRPFP62306 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
SNRPFP62306 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC18.5■□□□□ 0.55
SNRPFP62306 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
SNRPFP62306 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
SNRPFP62306 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
SNRPFP62306 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC18.5■□□□□ 0.55
SNRPFP62306 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC18.5■□□□□ 0.55
SNRPFP62306 RNA5SP415-201ENST00000517246 115 ntBASIC18.5■□□□□ 0.55
SNRPFP62306 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC18.5■□□□□ 0.55
SNRPFP62306 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC18.5■□□□□ 0.55
SNRPFP62306 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC18.5■□□□□ 0.55
SNRPFP62306 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC18.5■□□□□ 0.55
SNRPFP62306 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC18.5■□□□□ 0.55
SNRPFP62306 KLK8-205ENST00000593490 267 ntTSL 3 BASIC18.5■□□□□ 0.55
SNRPFP62306 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SNRPFP62306 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC18.5■□□□□ 0.55
SNRPFP62306 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SNRPFP62306 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
SNRPFP62306 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
SNRPFP62306 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SNRPFP62306 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SNRPFP62306 OS9-205ENST00000413095 1660 ntTSL 2 BASIC18.5■□□□□ 0.55
SNRPFP62306 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
SNRPFP62306 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC18.5■□□□□ 0.55
SNRPFP62306 AL391256.1-201ENST00000443260 1855 ntBASIC18.5■□□□□ 0.55
SNRPFP62306 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
SNRPFP62306 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SNRPFP62306 AL645728.1-201ENST00000366221 2101 ntBASIC18.49■□□□□ 0.55
SNRPFP62306 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
SNRPFP62306 HCG4-201ENST00000418983 998 ntBASIC18.49■□□□□ 0.55
SNRPFP62306 FAM185BP-201ENST00000443595 716 ntBASIC18.49■□□□□ 0.55
SNRPFP62306 HLA-J-202ENST00000469281 1241 ntBASIC18.49■□□□□ 0.55
SNRPFP62306 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC18.49■□□□□ 0.55
SNRPFP62306 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC18.49■□□□□ 0.55
SNRPFP62306 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC18.49■□□□□ 0.55
SNRPFP62306 AL121894.2-201ENST00000602977 491 ntBASIC18.49■□□□□ 0.55
SNRPFP62306 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC18.49■□□□□ 0.55
SNRPFP62306 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
SNRPFP62306 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
SNRPFP62306 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SNRPFP62306 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC18.49■□□□□ 0.55
SNRPFP62306 AC012313.1-201ENST00000593393 3059 ntBASIC18.49■□□□□ 0.55
SNRPFP62306 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
SNRPFP62306 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SNRPFP62306 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC18.49■□□□□ 0.55
SNRPFP62306 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC18.49■□□□□ 0.55
SNRPFP62306 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC18.49■□□□□ 0.55
SNRPFP62306 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC18.49■□□□□ 0.55
SNRPFP62306 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC18.49■□□□□ 0.55
SNRPFP62306 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SNRPFP62306 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
SNRPFP62306 FZD10-202ENST00000539839 3282 ntBASIC18.48■□□□□ 0.55
SNRPFP62306 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
SNRPFP62306 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms