Protein–RNA interactions for Protein: P52799

EFNB2, Ephrin-B2, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB2P52799 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
EFNB2P52799 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
EFNB2P52799 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
EFNB2P52799 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
EFNB2P52799 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
EFNB2P52799 MYCLP1-201ENST00000372451 1075 ntBASIC14.81□□□□□ -0.04
EFNB2P52799 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
EFNB2P52799 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC14.81□□□□□ -0.04
EFNB2P52799 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
EFNB2P52799 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC14.81□□□□□ -0.04
EFNB2P52799 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
EFNB2P52799 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC14.81□□□□□ -0.04
EFNB2P52799 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
EFNB2P52799 AC069148.1-201ENST00000608741 768 ntBASIC14.81□□□□□ -0.04
EFNB2P52799 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC14.81□□□□□ -0.04
EFNB2P52799 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
EFNB2P52799 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
EFNB2P52799 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC14.81□□□□□ -0.04
EFNB2P52799 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
EFNB2P52799 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC14.81□□□□□ -0.04
EFNB2P52799 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
EFNB2P52799 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
EFNB2P52799 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
EFNB2P52799 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC14.81□□□□□ -0.04
EFNB2P52799 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
EFNB2P52799 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC14.81□□□□□ -0.04
EFNB2P52799 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
EFNB2P52799 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
EFNB2P52799 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
EFNB2P52799 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
EFNB2P52799 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
EFNB2P52799 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC14.81□□□□□ -0.04
EFNB2P52799 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
EFNB2P52799 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
EFNB2P52799 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
EFNB2P52799 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
EFNB2P52799 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC14.8□□□□□ -0.04
EFNB2P52799 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
EFNB2P52799 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
EFNB2P52799 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
EFNB2P52799 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
EFNB2P52799 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC14.8□□□□□ -0.04
EFNB2P52799 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
EFNB2P52799 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
EFNB2P52799 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
EFNB2P52799 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC14.8□□□□□ -0.04
EFNB2P52799 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
EFNB2P52799 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
EFNB2P52799 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
EFNB2P52799 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
EFNB2P52799 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
EFNB2P52799 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
EFNB2P52799 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
EFNB2P52799 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC14.8□□□□□ -0.04
EFNB2P52799 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC14.8□□□□□ -0.04
EFNB2P52799 CLN6-214ENST00000636314 442 ntTSL 3 BASIC14.8□□□□□ -0.04
EFNB2P52799 AC097374.2-201ENST00000618617 1306 ntBASIC14.8□□□□□ -0.04
EFNB2P52799 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
EFNB2P52799 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC14.8□□□□□ -0.04
EFNB2P52799 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
EFNB2P52799 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
EFNB2P52799 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
EFNB2P52799 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC14.8□□□□□ -0.04
EFNB2P52799 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC14.8□□□□□ -0.04
EFNB2P52799 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
EFNB2P52799 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
EFNB2P52799 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
EFNB2P52799 HLA-A-202ENST00000376806 1854 ntBASIC14.8□□□□□ -0.04
EFNB2P52799 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
EFNB2P52799 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
EFNB2P52799 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC14.8□□□□□ -0.04
EFNB2P52799 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
EFNB2P52799 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
EFNB2P52799 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
EFNB2P52799 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
EFNB2P52799 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC14.79□□□□□ -0.04
EFNB2P52799 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
EFNB2P52799 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
EFNB2P52799 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
EFNB2P52799 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
EFNB2P52799 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
EFNB2P52799 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
EFNB2P52799 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
EFNB2P52799 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
EFNB2P52799 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
EFNB2P52799 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
EFNB2P52799 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
EFNB2P52799 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
EFNB2P52799 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC14.79□□□□□ -0.04
EFNB2P52799 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
EFNB2P52799 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
EFNB2P52799 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC14.79□□□□□ -0.04
EFNB2P52799 AP003733.1-201ENST00000491725 852 ntBASIC14.79□□□□□ -0.04
EFNB2P52799 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC14.79□□□□□ -0.04
EFNB2P52799 IGHV3-52-201ENST00000519770 353 ntBASIC14.79□□□□□ -0.04
EFNB2P52799 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
EFNB2P52799 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC14.79□□□□□ -0.04
EFNB2P52799 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
EFNB2P52799 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC14.79□□□□□ -0.04
EFNB2P52799 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms