Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 FO538757.1-201ENST00000623083 1397 ntBASIC17.83■□□□□ 0.45
MTHFRP42898 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
MTHFRP42898 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
MTHFRP42898 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
MTHFRP42898 ABALON-201ENST00000629058 1903 ntBASIC17.83■□□□□ 0.44
MTHFRP42898 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
MTHFRP42898 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
MTHFRP42898 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC17.83■□□□□ 0.44
MTHFRP42898 GAPDHP21-201ENST00000450301 1010 ntBASIC17.83■□□□□ 0.44
MTHFRP42898 AL512638.1-201ENST00000457493 794 ntBASIC17.83■□□□□ 0.44
MTHFRP42898 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC17.83■□□□□ 0.44
MTHFRP42898 AC107918.2-201ENST00000530817 355 ntBASIC17.83■□□□□ 0.44
MTHFRP42898 COX11-202ENST00000571584 1108 ntTSL 2 BASIC17.83■□□□□ 0.44
MTHFRP42898 LINC02560-201ENST00000596379 459 ntBASIC17.83■□□□□ 0.44
MTHFRP42898 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC17.83■□□□□ 0.44
MTHFRP42898 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC17.83■□□□□ 0.44
MTHFRP42898 AC008761.3-201ENST00000624803 892 ntBASIC17.83■□□□□ 0.44
MTHFRP42898 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
MTHFRP42898 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
MTHFRP42898 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
MTHFRP42898 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC17.83■□□□□ 0.44
MTHFRP42898 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
MTHFRP42898 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
MTHFRP42898 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
MTHFRP42898 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
MTHFRP42898 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
MTHFRP42898 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
MTHFRP42898 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC17.83■□□□□ 0.44
MTHFRP42898 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
MTHFRP42898 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
MTHFRP42898 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
MTHFRP42898 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC17.82■□□□□ 0.44
MTHFRP42898 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
MTHFRP42898 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC17.82■□□□□ 0.44
MTHFRP42898 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
MTHFRP42898 CD276-201ENST00000318424 2738 ntTSL 5 BASIC17.82■□□□□ 0.44
MTHFRP42898 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
MTHFRP42898 AC020916.1-201ENST00000587762 1774 ntBASIC17.82■□□□□ 0.44
MTHFRP42898 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC17.82■□□□□ 0.44
MTHFRP42898 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
MTHFRP42898 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
MTHFRP42898 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
MTHFRP42898 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC17.82■□□□□ 0.44
MTHFRP42898 TREML5P-201ENST00000421694 576 ntBASIC17.82■□□□□ 0.44
MTHFRP42898 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC17.82■□□□□ 0.44
MTHFRP42898 SLC25A39P2-201ENST00000537614 270 ntBASIC17.82■□□□□ 0.44
MTHFRP42898 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC17.82■□□□□ 0.44
MTHFRP42898 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC17.82■□□□□ 0.44
MTHFRP42898 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC17.82■□□□□ 0.44
MTHFRP42898 INO80E-210ENST00000567705 880 ntTSL 3 BASIC17.82■□□□□ 0.44
MTHFRP42898 AL158211.3-201ENST00000607385 239 ntBASIC17.82■□□□□ 0.44
MTHFRP42898 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC17.82■□□□□ 0.44
MTHFRP42898 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
MTHFRP42898 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
MTHFRP42898 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
MTHFRP42898 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
MTHFRP42898 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
MTHFRP42898 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC17.82■□□□□ 0.44
MTHFRP42898 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
MTHFRP42898 UXT-AS1-201ENST00000590504 1525 ntBASIC17.82■□□□□ 0.44
MTHFRP42898 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
MTHFRP42898 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC17.81■□□□□ 0.44
MTHFRP42898 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
MTHFRP42898 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
MTHFRP42898 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
MTHFRP42898 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC17.81■□□□□ 0.44
MTHFRP42898 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
MTHFRP42898 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC17.81■□□□□ 0.44
MTHFRP42898 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
MTHFRP42898 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
MTHFRP42898 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
MTHFRP42898 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
MTHFRP42898 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
MTHFRP42898 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
MTHFRP42898 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.81■□□□□ 0.44
MTHFRP42898 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
MTHFRP42898 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
MTHFRP42898 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
MTHFRP42898 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC17.81■□□□□ 0.44
MTHFRP42898 MIR661-201ENST00000384842 89 ntBASIC17.81■□□□□ 0.44
MTHFRP42898 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC17.81■□□□□ 0.44
MTHFRP42898 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC17.81■□□□□ 0.44
MTHFRP42898 UGT1A2P-201ENST00000454886 866 ntBASIC17.81■□□□□ 0.44
MTHFRP42898 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC17.81■□□□□ 0.44
MTHFRP42898 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC17.81■□□□□ 0.44
MTHFRP42898 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC17.81■□□□□ 0.44
MTHFRP42898 MMP17-203ENST00000535004 719 ntTSL 3 BASIC17.81■□□□□ 0.44
MTHFRP42898 AC026150.2-201ENST00000564693 1156 ntBASIC17.81■□□□□ 0.44
MTHFRP42898 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC17.81■□□□□ 0.44
MTHFRP42898 AL390754.1-201ENST00000619088 582 ntBASIC17.81■□□□□ 0.44
MTHFRP42898 HFE2-206ENST00000634927 506 ntTSL 4 BASIC17.81■□□□□ 0.44
MTHFRP42898 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC17.81■□□□□ 0.44
MTHFRP42898 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
MTHFRP42898 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
MTHFRP42898 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
MTHFRP42898 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
MTHFRP42898 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
MTHFRP42898 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
MTHFRP42898 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC17.81■□□□□ 0.44
MTHFRP42898 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms