Protein–RNA interactions for Protein: P17405

SMPD1, Sphingomyelin phosphodiesterase, humanhuman

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1P17405 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SMPD1P17405 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SMPD1P17405 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC18.86■□□□□ 0.61
SMPD1P17405 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC18.85■□□□□ 0.61
SMPD1P17405 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
SMPD1P17405 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SMPD1P17405 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SMPD1P17405 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC18.85■□□□□ 0.61
SMPD1P17405 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC18.85■□□□□ 0.61
SMPD1P17405 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
SMPD1P17405 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SMPD1P17405 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SMPD1P17405 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
SMPD1P17405 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SMPD1P17405 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
SMPD1P17405 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SMPD1P17405 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC18.85■□□□□ 0.61
SMPD1P17405 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
SMPD1P17405 WBP2-203ENST00000433525 928 ntTSL 2 BASIC18.85■□□□□ 0.61
SMPD1P17405 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC18.85■□□□□ 0.61
SMPD1P17405 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC18.85■□□□□ 0.61
SMPD1P17405 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC18.85■□□□□ 0.61
SMPD1P17405 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC18.85■□□□□ 0.61
SMPD1P17405 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC18.85■□□□□ 0.61
SMPD1P17405 AC069120.2-201ENST00000524091 540 ntBASIC18.85■□□□□ 0.61
SMPD1P17405 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC18.85■□□□□ 0.61
SMPD1P17405 AL390961.4-201ENST00000623958 2535 ntBASIC18.85■□□□□ 0.61
SMPD1P17405 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SMPD1P17405 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC18.85■□□□□ 0.61
SMPD1P17405 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SMPD1P17405 NARF-206ENST00000457415 1668 ntTSL 5 BASIC18.85■□□□□ 0.61
SMPD1P17405 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC18.85■□□□□ 0.61
SMPD1P17405 AC116353.5-201ENST00000638148 1699 ntBASIC18.85■□□□□ 0.61
SMPD1P17405 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC18.85■□□□□ 0.61
SMPD1P17405 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC18.85■□□□□ 0.61
SMPD1P17405 LINC00896-202ENST00000609602 2128 ntBASIC18.85■□□□□ 0.61
SMPD1P17405 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
SMPD1P17405 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SMPD1P17405 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC18.84■□□□□ 0.61
SMPD1P17405 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
SMPD1P17405 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SMPD1P17405 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SMPD1P17405 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SMPD1P17405 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SMPD1P17405 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SMPD1P17405 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SMPD1P17405 CD276-203ENST00000537340 2439 ntTSL 2 BASIC18.84■□□□□ 0.61
SMPD1P17405 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
SMPD1P17405 KRT8P49-201ENST00000604166 1432 ntBASIC18.84■□□□□ 0.61
SMPD1P17405 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SMPD1P17405 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SMPD1P17405 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC18.84■□□□□ 0.61
SMPD1P17405 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SMPD1P17405 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC18.84■□□□□ 0.61
SMPD1P17405 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SMPD1P17405 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SMPD1P17405 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SMPD1P17405 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
SMPD1P17405 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC18.84■□□□□ 0.61
SMPD1P17405 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC18.84■□□□□ 0.61
SMPD1P17405 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC18.84■□□□□ 0.61
SMPD1P17405 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC18.84■□□□□ 0.61
SMPD1P17405 AC092580.3-201ENST00000430932 139 ntBASIC18.84■□□□□ 0.61
SMPD1P17405 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC18.84■□□□□ 0.61
SMPD1P17405 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
SMPD1P17405 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC18.84■□□□□ 0.61
SMPD1P17405 TERF1P3-201ENST00000505638 1227 ntBASIC18.84■□□□□ 0.61
SMPD1P17405 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC18.84■□□□□ 0.61
SMPD1P17405 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SMPD1P17405 MIR4453-201ENST00000584019 89 ntBASIC18.84■□□□□ 0.61
SMPD1P17405 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC18.84■□□□□ 0.61
SMPD1P17405 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SMPD1P17405 CYP2A7P1-201ENST00000595391 815 ntBASIC18.84■□□□□ 0.61
SMPD1P17405 NKG7-205ENST00000600427 520 ntTSL 3 BASIC18.84■□□□□ 0.61
SMPD1P17405 YTHDF3-AS1-201ENST00000603538 718 ntBASIC18.84■□□□□ 0.61
SMPD1P17405 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SMPD1P17405 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC18.84■□□□□ 0.61
SMPD1P17405 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
SMPD1P17405 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC18.84■□□□□ 0.61
SMPD1P17405 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SMPD1P17405 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
SMPD1P17405 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC18.83■□□□□ 0.61
SMPD1P17405 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC18.83■□□□□ 0.61
SMPD1P17405 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SMPD1P17405 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SMPD1P17405 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
SMPD1P17405 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC18.83■□□□□ 0.6
SMPD1P17405 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC18.83■□□□□ 0.6
SMPD1P17405 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC18.83■□□□□ 0.6
SMPD1P17405 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
SMPD1P17405 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC18.83■□□□□ 0.6
SMPD1P17405 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC18.83■□□□□ 0.6
SMPD1P17405 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC18.83■□□□□ 0.6
SMPD1P17405 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC18.83■□□□□ 0.6
SMPD1P17405 MIR4492-201ENST00000581627 80 ntBASIC18.83■□□□□ 0.6
SMPD1P17405 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC18.83■□□□□ 0.6
SMPD1P17405 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC18.83■□□□□ 0.6
SMPD1P17405 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC18.83■□□□□ 0.6
SMPD1P17405 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SMPD1P17405 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms