Protein–RNA interactions for Protein: O15255

RTL8C, CAAX box protein 1, humanhuman

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL8CO15255 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
RTL8CO15255 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC11.35□□□□□ -0.59
RTL8CO15255 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC11.35□□□□□ -0.59
RTL8CO15255 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC11.35□□□□□ -0.59
RTL8CO15255 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC11.35□□□□□ -0.59
RTL8CO15255 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC11.35□□□□□ -0.59
RTL8CO15255 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC11.35□□□□□ -0.59
RTL8CO15255 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC11.35□□□□□ -0.59
RTL8CO15255 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
RTL8CO15255 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC11.35□□□□□ -0.59
RTL8CO15255 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC11.35□□□□□ -0.59
RTL8CO15255 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
RTL8CO15255 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC11.35□□□□□ -0.59
RTL8CO15255 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
RTL8CO15255 AC026150.2-201ENST00000564693 1156 ntBASIC11.35□□□□□ -0.59
RTL8CO15255 COX11-202ENST00000571584 1108 ntTSL 2 BASIC11.35□□□□□ -0.59
RTL8CO15255 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC11.35□□□□□ -0.59
RTL8CO15255 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
RTL8CO15255 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC11.35□□□□□ -0.59
RTL8CO15255 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC11.35□□□□□ -0.59
RTL8CO15255 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
RTL8CO15255 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
RTL8CO15255 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
RTL8CO15255 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
RTL8CO15255 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC11.35□□□□□ -0.59
RTL8CO15255 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
RTL8CO15255 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
RTL8CO15255 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC11.35□□□□□ -0.59
RTL8CO15255 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
RTL8CO15255 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC11.35□□□□□ -0.59
RTL8CO15255 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
RTL8CO15255 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC11.35□□□□□ -0.59
RTL8CO15255 AMT-250ENST00000637682 1823 ntTSL 5 BASIC11.35□□□□□ -0.59
RTL8CO15255 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
RTL8CO15255 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC11.35□□□□□ -0.59
RTL8CO15255 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC11.35□□□□□ -0.59
RTL8CO15255 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
RTL8CO15255 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC11.34□□□□□ -0.59
RTL8CO15255 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC11.34□□□□□ -0.59
RTL8CO15255 NFIC-211ENST00000641145 8399 ntBASIC11.34□□□□□ -0.59
RTL8CO15255 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
RTL8CO15255 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
RTL8CO15255 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
RTL8CO15255 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
RTL8CO15255 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
RTL8CO15255 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
RTL8CO15255 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC11.34□□□□□ -0.59
RTL8CO15255 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
RTL8CO15255 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
RTL8CO15255 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
RTL8CO15255 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
RTL8CO15255 AC009113.1-201ENST00000570267 2443 ntBASIC11.34□□□□□ -0.59
RTL8CO15255 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
RTL8CO15255 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
RTL8CO15255 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
RTL8CO15255 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC11.34□□□□□ -0.59
RTL8CO15255 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
RTL8CO15255 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC11.34□□□□□ -0.59
RTL8CO15255 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
RTL8CO15255 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
RTL8CO15255 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC11.34□□□□□ -0.59
RTL8CO15255 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC11.34□□□□□ -0.59
RTL8CO15255 AC007274.1-201ENST00000439805 662 ntBASIC11.34□□□□□ -0.59
RTL8CO15255 SPDYE14P-201ENST00000442619 822 ntBASIC11.34□□□□□ -0.59
RTL8CO15255 AL512638.1-201ENST00000457493 794 ntBASIC11.34□□□□□ -0.59
RTL8CO15255 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC11.34□□□□□ -0.59
RTL8CO15255 IGHV3-62-201ENST00000520057 340 ntBASIC11.34□□□□□ -0.59
RTL8CO15255 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
RTL8CO15255 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC11.34□□□□□ -0.59
RTL8CO15255 LINC01225-203ENST00000563550 1244 ntBASIC11.34□□□□□ -0.59
RTL8CO15255 MIR4515-201ENST00000584082 81 ntBASIC11.34□□□□□ -0.59
RTL8CO15255 AL161645.1-201ENST00000622716 1255 ntBASIC11.34□□□□□ -0.59
RTL8CO15255 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
RTL8CO15255 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
RTL8CO15255 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
RTL8CO15255 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC11.34□□□□□ -0.59
RTL8CO15255 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC11.34□□□□□ -0.59
RTL8CO15255 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
RTL8CO15255 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC11.34□□□□□ -0.59
RTL8CO15255 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC11.34□□□□□ -0.59
RTL8CO15255 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
RTL8CO15255 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC11.34□□□□□ -0.59
RTL8CO15255 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
RTL8CO15255 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
RTL8CO15255 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
RTL8CO15255 UXT-AS1-201ENST00000590504 1525 ntBASIC11.34□□□□□ -0.59
RTL8CO15255 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC11.34□□□□□ -0.59
RTL8CO15255 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC11.34□□□□□ -0.59
RTL8CO15255 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC11.34□□□□□ -0.59
RTL8CO15255 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
RTL8CO15255 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
RTL8CO15255 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
RTL8CO15255 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC11.33□□□□□ -0.6
RTL8CO15255 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
RTL8CO15255 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
RTL8CO15255 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
RTL8CO15255 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
RTL8CO15255 AC138028.4-201ENST00000564984 1845 ntBASIC11.33□□□□□ -0.6
RTL8CO15255 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
RTL8CO15255 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms