Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
NDUFA1O15239 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
NDUFA1O15239 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC11.74□□□□□ -0.53
NDUFA1O15239 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC11.74□□□□□ -0.53
NDUFA1O15239 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC11.74□□□□□ -0.53
NDUFA1O15239 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
NDUFA1O15239 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
NDUFA1O15239 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC11.74□□□□□ -0.53
NDUFA1O15239 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
NDUFA1O15239 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC11.73□□□□□ -0.53
NDUFA1O15239 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC11.73□□□□□ -0.53
NDUFA1O15239 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
NDUFA1O15239 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
NDUFA1O15239 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
NDUFA1O15239 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
NDUFA1O15239 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
NDUFA1O15239 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
NDUFA1O15239 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
NDUFA1O15239 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
NDUFA1O15239 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
NDUFA1O15239 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
NDUFA1O15239 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
NDUFA1O15239 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
NDUFA1O15239 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC11.73□□□□□ -0.53
NDUFA1O15239 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
NDUFA1O15239 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
NDUFA1O15239 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
NDUFA1O15239 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
NDUFA1O15239 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
NDUFA1O15239 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
NDUFA1O15239 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
NDUFA1O15239 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
NDUFA1O15239 HES2-202ENST00000377836 507 ntTSL 2 BASIC11.73□□□□□ -0.53
NDUFA1O15239 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
NDUFA1O15239 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
NDUFA1O15239 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
NDUFA1O15239 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
NDUFA1O15239 TSPY12P-201ENST00000421279 868 ntBASIC11.73□□□□□ -0.53
NDUFA1O15239 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
NDUFA1O15239 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC11.73□□□□□ -0.53
NDUFA1O15239 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
NDUFA1O15239 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
NDUFA1O15239 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC11.73□□□□□ -0.53
NDUFA1O15239 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
NDUFA1O15239 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
NDUFA1O15239 CD81-212ENST00000526072 1172 ntTSL 5 BASIC11.73□□□□□ -0.53
NDUFA1O15239 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC11.73□□□□□ -0.53
NDUFA1O15239 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC11.73□□□□□ -0.53
NDUFA1O15239 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
NDUFA1O15239 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
NDUFA1O15239 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC11.73□□□□□ -0.53
NDUFA1O15239 GCSHP2-201ENST00000560971 527 ntBASIC11.73□□□□□ -0.53
NDUFA1O15239 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
NDUFA1O15239 AL136038.4-201ENST00000603606 1261 ntBASIC11.73□□□□□ -0.53
NDUFA1O15239 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC11.73□□□□□ -0.53
NDUFA1O15239 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
NDUFA1O15239 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
NDUFA1O15239 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
NDUFA1O15239 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
NDUFA1O15239 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC11.73□□□□□ -0.53
NDUFA1O15239 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC11.72□□□□□ -0.53
NDUFA1O15239 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC11.72□□□□□ -0.53
NDUFA1O15239 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC11.72□□□□□ -0.53
NDUFA1O15239 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
NDUFA1O15239 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC11.72□□□□□ -0.53
NDUFA1O15239 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC11.72□□□□□ -0.53
NDUFA1O15239 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
NDUFA1O15239 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
NDUFA1O15239 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
NDUFA1O15239 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
NDUFA1O15239 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
NDUFA1O15239 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
NDUFA1O15239 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC11.72□□□□□ -0.53
NDUFA1O15239 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
NDUFA1O15239 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
NDUFA1O15239 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC11.72□□□□□ -0.53
NDUFA1O15239 LINC00554-201ENST00000564841 3011 ntBASIC11.72□□□□□ -0.53
NDUFA1O15239 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
NDUFA1O15239 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC11.72□□□□□ -0.53
NDUFA1O15239 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
NDUFA1O15239 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC11.72□□□□□ -0.53
NDUFA1O15239 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
NDUFA1O15239 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
NDUFA1O15239 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC11.72□□□□□ -0.53
NDUFA1O15239 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
NDUFA1O15239 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
NDUFA1O15239 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC11.72□□□□□ -0.53
NDUFA1O15239 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC11.72□□□□□ -0.53
NDUFA1O15239 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC11.72□□□□□ -0.53
NDUFA1O15239 TSPY15P-201ENST00000457163 923 ntBASIC11.72□□□□□ -0.53
NDUFA1O15239 RASA4DP-201ENST00000460726 1199 ntBASIC11.72□□□□□ -0.53
NDUFA1O15239 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
NDUFA1O15239 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC11.72□□□□□ -0.53
NDUFA1O15239 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC11.72□□□□□ -0.53
NDUFA1O15239 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC11.72□□□□□ -0.53
NDUFA1O15239 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC11.72□□□□□ -0.53
NDUFA1O15239 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC11.72□□□□□ -0.53
NDUFA1O15239 AC009154.2-201ENST00000621177 724 ntBASIC11.72□□□□□ -0.53
NDUFA1O15239 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
NDUFA1O15239 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms