Protein–RNA interactions for Protein: E9PAV3

NACA, Nascent polypeptide-associated complex subunit alpha, muscle-specific form, humanhuman

Predictions only

Length 2,078 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NACAE9PAV3 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
NACAE9PAV3 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC12.56□□□□□ -0.4
NACAE9PAV3 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC12.56□□□□□ -0.4
NACAE9PAV3 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
NACAE9PAV3 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
NACAE9PAV3 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
NACAE9PAV3 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
NACAE9PAV3 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
NACAE9PAV3 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
NACAE9PAV3 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
NACAE9PAV3 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
NACAE9PAV3 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
NACAE9PAV3 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
NACAE9PAV3 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC12.55□□□□□ -0.4
NACAE9PAV3 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
NACAE9PAV3 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
NACAE9PAV3 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
NACAE9PAV3 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
NACAE9PAV3 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC12.55□□□□□ -0.4
NACAE9PAV3 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
NACAE9PAV3 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC12.55□□□□□ -0.4
NACAE9PAV3 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
NACAE9PAV3 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC12.55□□□□□ -0.4
NACAE9PAV3 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
NACAE9PAV3 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
NACAE9PAV3 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
NACAE9PAV3 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
NACAE9PAV3 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
NACAE9PAV3 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
NACAE9PAV3 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
NACAE9PAV3 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
NACAE9PAV3 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
NACAE9PAV3 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
NACAE9PAV3 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC12.55□□□□□ -0.4
NACAE9PAV3 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
NACAE9PAV3 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
NACAE9PAV3 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
NACAE9PAV3 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC12.55□□□□□ -0.4
NACAE9PAV3 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
NACAE9PAV3 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
NACAE9PAV3 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
NACAE9PAV3 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
NACAE9PAV3 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
NACAE9PAV3 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
NACAE9PAV3 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
NACAE9PAV3 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
NACAE9PAV3 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
NACAE9PAV3 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
NACAE9PAV3 GUSBP12-201ENST00000513727 720 ntBASIC12.55□□□□□ -0.4
NACAE9PAV3 AP000867.3-201ENST00000524675 377 ntBASIC12.55□□□□□ -0.4
NACAE9PAV3 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC12.55□□□□□ -0.4
NACAE9PAV3 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC12.55□□□□□ -0.4
NACAE9PAV3 AC011840.4-201ENST00000578471 627 ntBASIC12.55□□□□□ -0.4
NACAE9PAV3 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
NACAE9PAV3 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
NACAE9PAV3 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC12.55□□□□□ -0.4
NACAE9PAV3 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC12.55□□□□□ -0.4
NACAE9PAV3 ALPK3-201ENST00000258888 10917 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
NACAE9PAV3 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC12.55□□□□□ -0.4
NACAE9PAV3 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
NACAE9PAV3 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC12.55□□□□□ -0.4
NACAE9PAV3 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
NACAE9PAV3 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
NACAE9PAV3 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
NACAE9PAV3 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC12.55□□□□□ -0.4
NACAE9PAV3 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
NACAE9PAV3 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
NACAE9PAV3 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
NACAE9PAV3 AC116353.5-201ENST00000638148 1699 ntBASIC12.54□□□□□ -0.4
NACAE9PAV3 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC12.54□□□□□ -0.4
NACAE9PAV3 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
NACAE9PAV3 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
NACAE9PAV3 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC12.54□□□□□ -0.4
NACAE9PAV3 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
NACAE9PAV3 AC060834.1-201ENST00000443027 2032 ntBASIC12.54□□□□□ -0.4
NACAE9PAV3 OVCH1-AS1-204ENST00000641955 5529 ntBASIC12.54□□□□□ -0.4
NACAE9PAV3 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
NACAE9PAV3 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC12.54□□□□□ -0.4
NACAE9PAV3 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
NACAE9PAV3 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
NACAE9PAV3 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
NACAE9PAV3 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
NACAE9PAV3 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
NACAE9PAV3 AC026396.1-201ENST00000419388 421 ntBASIC12.54□□□□□ -0.4
NACAE9PAV3 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC12.54□□□□□ -0.4
NACAE9PAV3 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
NACAE9PAV3 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
NACAE9PAV3 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
NACAE9PAV3 NF2-208ENST00000403435 2568 ntTSL 5 BASIC12.54□□□□□ -0.4
NACAE9PAV3 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
NACAE9PAV3 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
NACAE9PAV3 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
NACAE9PAV3 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
NACAE9PAV3 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
NACAE9PAV3 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC12.54□□□□□ -0.4
NACAE9PAV3 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
NACAE9PAV3 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC12.54□□□□□ -0.4
NACAE9PAV3 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
NACAE9PAV3 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
NACAE9PAV3 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms