Protein–RNA interactions for Protein: Q9Y696

CLIC4, Chloride intracellular channel protein 4, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4Q9Y696 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLIC4Q9Y696 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLIC4Q9Y696 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLIC4Q9Y696 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLIC4Q9Y696 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLIC4Q9Y696 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC19.51■□□□□ 0.71
CLIC4Q9Y696 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLIC4Q9Y696 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLIC4Q9Y696 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
CLIC4Q9Y696 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLIC4Q9Y696 LSM5-204ENST00000409909 740 ntTSL 2 BASIC19.51■□□□□ 0.71
CLIC4Q9Y696 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CLIC4Q9Y696 NKAPP1-205ENST00000585790 367 ntBASIC19.51■□□□□ 0.71
CLIC4Q9Y696 AL353135.1-201ENST00000606729 504 ntBASIC19.51■□□□□ 0.71
CLIC4Q9Y696 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC19.51■□□□□ 0.71
CLIC4Q9Y696 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
CLIC4Q9Y696 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLIC4Q9Y696 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CLIC4Q9Y696 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLIC4Q9Y696 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CLIC4Q9Y696 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLIC4Q9Y696 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CLIC4Q9Y696 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CLIC4Q9Y696 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLIC4Q9Y696 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLIC4Q9Y696 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
CLIC4Q9Y696 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CLIC4Q9Y696 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC19.51■□□□□ 0.71
CLIC4Q9Y696 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC19.51■□□□□ 0.71
CLIC4Q9Y696 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC19.51■□□□□ 0.71
CLIC4Q9Y696 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLIC4Q9Y696 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CLIC4Q9Y696 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CLIC4Q9Y696 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLIC4Q9Y696 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLIC4Q9Y696 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CLIC4Q9Y696 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLIC4Q9Y696 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CLIC4Q9Y696 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLIC4Q9Y696 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLIC4Q9Y696 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
CLIC4Q9Y696 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
CLIC4Q9Y696 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CLIC4Q9Y696 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLIC4Q9Y696 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
CLIC4Q9Y696 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
CLIC4Q9Y696 AP002414.1-201ENST00000391405 1147 ntBASIC19.5■□□□□ 0.71
CLIC4Q9Y696 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC19.5■□□□□ 0.71
CLIC4Q9Y696 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC19.5■□□□□ 0.71
CLIC4Q9Y696 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC19.5■□□□□ 0.71
CLIC4Q9Y696 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC19.5■□□□□ 0.71
CLIC4Q9Y696 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
CLIC4Q9Y696 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLIC4Q9Y696 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLIC4Q9Y696 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC19.5■□□□□ 0.71
CLIC4Q9Y696 AL662844.4-201ENST00000606367 2838 ntBASIC19.5■□□□□ 0.71
CLIC4Q9Y696 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
CLIC4Q9Y696 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CLIC4Q9Y696 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLIC4Q9Y696 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC19.5■□□□□ 0.71
CLIC4Q9Y696 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLIC4Q9Y696 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC19.5■□□□□ 0.71
CLIC4Q9Y696 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CLIC4Q9Y696 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC19.49■□□□□ 0.71
CLIC4Q9Y696 PCDH8P1-201ENST00000428983 2773 ntBASIC19.49■□□□□ 0.71
CLIC4Q9Y696 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CLIC4Q9Y696 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CLIC4Q9Y696 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CLIC4Q9Y696 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CLIC4Q9Y696 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CLIC4Q9Y696 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CLIC4Q9Y696 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CLIC4Q9Y696 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CLIC4Q9Y696 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC19.49■□□□□ 0.71
CLIC4Q9Y696 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CLIC4Q9Y696 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC19.49■□□□□ 0.71
CLIC4Q9Y696 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CLIC4Q9Y696 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CLIC4Q9Y696 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CLIC4Q9Y696 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC19.49■□□□□ 0.71
CLIC4Q9Y696 PRYP5-201ENST00000451909 266 ntBASIC19.49■□□□□ 0.71
CLIC4Q9Y696 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CLIC4Q9Y696 COX5A-202ENST00000562233 441 ntTSL 3 BASIC19.49■□□□□ 0.71
CLIC4Q9Y696 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC19.49■□□□□ 0.71
CLIC4Q9Y696 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC19.49■□□□□ 0.71
CLIC4Q9Y696 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC19.49■□□□□ 0.71
CLIC4Q9Y696 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CLIC4Q9Y696 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CLIC4Q9Y696 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CLIC4Q9Y696 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
CLIC4Q9Y696 HLA-A-202ENST00000376806 1854 ntBASIC19.49■□□□□ 0.71
CLIC4Q9Y696 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
CLIC4Q9Y696 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC19.49■□□□□ 0.71
CLIC4Q9Y696 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CLIC4Q9Y696 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
CLIC4Q9Y696 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC19.49■□□□□ 0.71
CLIC4Q9Y696 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC19.48■□□□□ 0.71
CLIC4Q9Y696 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
CLIC4Q9Y696 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
CLIC4Q9Y696 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms