Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 MAL2-202ENST00000531508 892 ntTSL 3 BASIC17.05■□□□□ 0.32
ECHDC3Q96DC8 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC17.05■□□□□ 0.32
ECHDC3Q96DC8 AC005412.3-201ENST00000580309 715 ntBASIC17.05■□□□□ 0.32
ECHDC3Q96DC8 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC17.05■□□□□ 0.32
ECHDC3Q96DC8 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC17.05■□□□□ 0.32
ECHDC3Q96DC8 BSG-214ENST00000614867 960 ntTSL 3 BASIC17.05■□□□□ 0.32
ECHDC3Q96DC8 AC004877.2-201ENST00000623941 599 ntBASIC17.05■□□□□ 0.32
ECHDC3Q96DC8 AC092865.6-201ENST00000642101 219 ntBASIC17.05■□□□□ 0.32
ECHDC3Q96DC8 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC17.05■□□□□ 0.32
ECHDC3Q96DC8 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
ECHDC3Q96DC8 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
ECHDC3Q96DC8 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
ECHDC3Q96DC8 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
ECHDC3Q96DC8 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
ECHDC3Q96DC8 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ECHDC3Q96DC8 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ECHDC3Q96DC8 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
ECHDC3Q96DC8 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ECHDC3Q96DC8 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ECHDC3Q96DC8 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ECHDC3Q96DC8 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ECHDC3Q96DC8 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC17.04■□□□□ 0.32
ECHDC3Q96DC8 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC17.04■□□□□ 0.32
ECHDC3Q96DC8 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
ECHDC3Q96DC8 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC17.04■□□□□ 0.32
ECHDC3Q96DC8 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ECHDC3Q96DC8 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ECHDC3Q96DC8 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ECHDC3Q96DC8 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ECHDC3Q96DC8 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC17.04■□□□□ 0.32
ECHDC3Q96DC8 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ECHDC3Q96DC8 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC17.04■□□□□ 0.32
ECHDC3Q96DC8 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
ECHDC3Q96DC8 KRT19P2-202ENST00000557173 1012 ntBASIC17.04■□□□□ 0.32
ECHDC3Q96DC8 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
ECHDC3Q96DC8 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC17.04■□□□□ 0.32
ECHDC3Q96DC8 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
ECHDC3Q96DC8 AC023141.13-201ENST00000604991 943 ntBASIC17.04■□□□□ 0.32
ECHDC3Q96DC8 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ECHDC3Q96DC8 AL513190.1-201ENST00000621254 727 ntBASIC17.04■□□□□ 0.32
ECHDC3Q96DC8 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
ECHDC3Q96DC8 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC17.04■□□□□ 0.32
ECHDC3Q96DC8 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ECHDC3Q96DC8 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ECHDC3Q96DC8 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
ECHDC3Q96DC8 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
ECHDC3Q96DC8 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ECHDC3Q96DC8 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ECHDC3Q96DC8 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ECHDC3Q96DC8 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
ECHDC3Q96DC8 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ECHDC3Q96DC8 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ECHDC3Q96DC8 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC17.03■□□□□ 0.32
ECHDC3Q96DC8 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ECHDC3Q96DC8 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
ECHDC3Q96DC8 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ECHDC3Q96DC8 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
ECHDC3Q96DC8 PMP22-202ENST00000395936 816 ntTSL 3 BASIC17.03■□□□□ 0.32
ECHDC3Q96DC8 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
ECHDC3Q96DC8 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
ECHDC3Q96DC8 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC17.03■□□□□ 0.32
ECHDC3Q96DC8 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC17.03■□□□□ 0.32
ECHDC3Q96DC8 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC17.03■□□□□ 0.32
ECHDC3Q96DC8 PDPK2P-202ENST00000562415 1191 ntBASIC17.03■□□□□ 0.32
ECHDC3Q96DC8 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
ECHDC3Q96DC8 AC002347.1-201ENST00000569543 541 ntBASIC17.03■□□□□ 0.32
ECHDC3Q96DC8 AC091167.2-201ENST00000579581 588 ntBASIC17.03■□□□□ 0.32
ECHDC3Q96DC8 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC17.03■□□□□ 0.32
ECHDC3Q96DC8 AC007064.4-201ENST00000637740 555 ntBASIC17.03■□□□□ 0.32
ECHDC3Q96DC8 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ECHDC3Q96DC8 AL353732.1-201ENST00000569618 1459 ntBASIC17.03■□□□□ 0.32
ECHDC3Q96DC8 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC17.03■□□□□ 0.32
ECHDC3Q96DC8 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
ECHDC3Q96DC8 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
ECHDC3Q96DC8 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ECHDC3Q96DC8 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ECHDC3Q96DC8 AC092068.3-201ENST00000587894 2016 ntBASIC17.03■□□□□ 0.32
ECHDC3Q96DC8 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
ECHDC3Q96DC8 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
ECHDC3Q96DC8 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC17.02■□□□□ 0.32
ECHDC3Q96DC8 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
ECHDC3Q96DC8 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ECHDC3Q96DC8 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
ECHDC3Q96DC8 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
ECHDC3Q96DC8 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
ECHDC3Q96DC8 TUBB8P12-201ENST00000308911 1335 ntBASIC17.02■□□□□ 0.32
ECHDC3Q96DC8 TUBB7P-202ENST00000428444 1305 ntBASIC17.02■□□□□ 0.32
ECHDC3Q96DC8 BCAR1-209ENST00000546196 1340 ntBASIC17.02■□□□□ 0.32
ECHDC3Q96DC8 TUBB8P7-204ENST00000567960 1332 ntBASIC17.02■□□□□ 0.32
ECHDC3Q96DC8 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
ECHDC3Q96DC8 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC17.02■□□□□ 0.32
ECHDC3Q96DC8 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC17.02■□□□□ 0.32
ECHDC3Q96DC8 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ECHDC3Q96DC8 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
ECHDC3Q96DC8 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
ECHDC3Q96DC8 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
ECHDC3Q96DC8 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
ECHDC3Q96DC8 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
ECHDC3Q96DC8 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ECHDC3Q96DC8 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms