Protein–RNA interactions for Protein: Q8NEP3

DNAAF1, Dynein assembly factor 1, axonemal, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF1Q8NEP3 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC15.12■□□□□ 0.01
DNAAF1Q8NEP3 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
DNAAF1Q8NEP3 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
DNAAF1Q8NEP3 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
DNAAF1Q8NEP3 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
DNAAF1Q8NEP3 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
DNAAF1Q8NEP3 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
DNAAF1Q8NEP3 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
DNAAF1Q8NEP3 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
DNAAF1Q8NEP3 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC15.11■□□□□ 0.01
DNAAF1Q8NEP3 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
DNAAF1Q8NEP3 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
DNAAF1Q8NEP3 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
DNAAF1Q8NEP3 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
DNAAF1Q8NEP3 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC15.11■□□□□ 0.01
DNAAF1Q8NEP3 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC15.11■□□□□ 0.01
DNAAF1Q8NEP3 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
DNAAF1Q8NEP3 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
DNAAF1Q8NEP3 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
DNAAF1Q8NEP3 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
DNAAF1Q8NEP3 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
DNAAF1Q8NEP3 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
DNAAF1Q8NEP3 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
DNAAF1Q8NEP3 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
DNAAF1Q8NEP3 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC15.11■□□□□ 0.01
DNAAF1Q8NEP3 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
DNAAF1Q8NEP3 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
DNAAF1Q8NEP3 CNP-204ENST00000472031 1019 ntTSL 2 BASIC15.11■□□□□ 0.01
DNAAF1Q8NEP3 AC002558.1-201ENST00000488906 803 ntBASIC15.11■□□□□ 0.01
DNAAF1Q8NEP3 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC15.11■□□□□ 0.01
DNAAF1Q8NEP3 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC15.11■□□□□ 0.01
DNAAF1Q8NEP3 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC15.11■□□□□ 0.01
DNAAF1Q8NEP3 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC15.11■□□□□ 0.01
DNAAF1Q8NEP3 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC15.11■□□□□ 0.01
DNAAF1Q8NEP3 AC006011.2-201ENST00000621313 1158 ntBASIC15.11■□□□□ 0.01
DNAAF1Q8NEP3 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
DNAAF1Q8NEP3 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
DNAAF1Q8NEP3 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
DNAAF1Q8NEP3 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
DNAAF1Q8NEP3 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC15.11■□□□□ 0.01
DNAAF1Q8NEP3 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC15.11■□□□□ 0.01
DNAAF1Q8NEP3 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
DNAAF1Q8NEP3 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
DNAAF1Q8NEP3 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC15.11■□□□□ 0.01
DNAAF1Q8NEP3 TBC1D3P5-201ENST00000579401 1545 ntBASIC15.11■□□□□ 0.01
DNAAF1Q8NEP3 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
DNAAF1Q8NEP3 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC15.11■□□□□ 0.01
DNAAF1Q8NEP3 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC15.11■□□□□ 0.01
DNAAF1Q8NEP3 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
DNAAF1Q8NEP3 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
DNAAF1Q8NEP3 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC15.11■□□□□ 0.01
DNAAF1Q8NEP3 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC15.11■□□□□ 0.01
DNAAF1Q8NEP3 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
DNAAF1Q8NEP3 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
DNAAF1Q8NEP3 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC15.11■□□□□ 0.01
DNAAF1Q8NEP3 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
DNAAF1Q8NEP3 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
DNAAF1Q8NEP3 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
DNAAF1Q8NEP3 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
DNAAF1Q8NEP3 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
DNAAF1Q8NEP3 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
DNAAF1Q8NEP3 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC15.1■□□□□ 0.01
DNAAF1Q8NEP3 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
DNAAF1Q8NEP3 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
DNAAF1Q8NEP3 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC15.1■□□□□ 0.01
DNAAF1Q8NEP3 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
DNAAF1Q8NEP3 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
DNAAF1Q8NEP3 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
DNAAF1Q8NEP3 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
DNAAF1Q8NEP3 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
DNAAF1Q8NEP3 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
DNAAF1Q8NEP3 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
DNAAF1Q8NEP3 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
DNAAF1Q8NEP3 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
DNAAF1Q8NEP3 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
DNAAF1Q8NEP3 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC15.1■□□□□ 0.01
DNAAF1Q8NEP3 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
DNAAF1Q8NEP3 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
DNAAF1Q8NEP3 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
DNAAF1Q8NEP3 KRT18P57-201ENST00000443599 1254 ntBASIC15.1■□□□□ 0.01
DNAAF1Q8NEP3 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
DNAAF1Q8NEP3 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC15.1■□□□□ 0.01
DNAAF1Q8NEP3 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
DNAAF1Q8NEP3 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC15.1■□□□□ 0.01
DNAAF1Q8NEP3 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC15.1■□□□□ 0.01
DNAAF1Q8NEP3 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
DNAAF1Q8NEP3 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
DNAAF1Q8NEP3 WDR6-223ENST00000627177 207 ntTSL 2 BASIC15.1■□□□□ 0.01
DNAAF1Q8NEP3 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC15.1■□□□□ 0.01
DNAAF1Q8NEP3 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
DNAAF1Q8NEP3 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC15.1■□□□□ 0.01
DNAAF1Q8NEP3 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
DNAAF1Q8NEP3 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC15.1■□□□□ 0.01
DNAAF1Q8NEP3 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
DNAAF1Q8NEP3 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC15.1■□□□□ 0.01
DNAAF1Q8NEP3 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
DNAAF1Q8NEP3 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
DNAAF1Q8NEP3 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
DNAAF1Q8NEP3 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
DNAAF1Q8NEP3 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 64.6 ms