Protein–RNA interactions for Protein: Q8NDV7

TNRC6A, Trinucleotide repeat-containing gene 6A protein, humanhuman

Known RBP Predictions only

Length 1,962 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6AQ8NDV7 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TNRC6AQ8NDV7 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
TNRC6AQ8NDV7 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
TNRC6AQ8NDV7 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TNRC6AQ8NDV7 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
TNRC6AQ8NDV7 RNU1-129P-201ENST00000384064 167 ntBASIC15.46■□□□□ 0.07
TNRC6AQ8NDV7 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC15.46■□□□□ 0.07
TNRC6AQ8NDV7 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TNRC6AQ8NDV7 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TNRC6AQ8NDV7 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC15.46■□□□□ 0.07
TNRC6AQ8NDV7 AL512356.2-201ENST00000546955 174 ntBASIC15.46■□□□□ 0.07
TNRC6AQ8NDV7 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC15.46■□□□□ 0.07
TNRC6AQ8NDV7 U1.21-201ENST00000580816 167 ntBASIC15.46■□□□□ 0.07
TNRC6AQ8NDV7 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC15.46■□□□□ 0.07
TNRC6AQ8NDV7 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC15.46■□□□□ 0.07
TNRC6AQ8NDV7 CECR7-204ENST00000609932 568 ntTSL 2 BASIC15.46■□□□□ 0.07
TNRC6AQ8NDV7 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TNRC6AQ8NDV7 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TNRC6AQ8NDV7 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
TNRC6AQ8NDV7 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
TNRC6AQ8NDV7 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC15.46■□□□□ 0.07
TNRC6AQ8NDV7 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC15.46■□□□□ 0.07
TNRC6AQ8NDV7 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
TNRC6AQ8NDV7 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TNRC6AQ8NDV7 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TNRC6AQ8NDV7 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
TNRC6AQ8NDV7 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC15.46■□□□□ 0.06
TNRC6AQ8NDV7 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC15.46■□□□□ 0.06
TNRC6AQ8NDV7 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.06
TNRC6AQ8NDV7 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC15.46■□□□□ 0.06
TNRC6AQ8NDV7 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC15.46■□□□□ 0.06
TNRC6AQ8NDV7 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
TNRC6AQ8NDV7 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
TNRC6AQ8NDV7 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TNRC6AQ8NDV7 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
TNRC6AQ8NDV7 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
TNRC6AQ8NDV7 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC15.45■□□□□ 0.06
TNRC6AQ8NDV7 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC15.45■□□□□ 0.06
TNRC6AQ8NDV7 INGX-202ENST00000489074 768 ntBASIC15.45■□□□□ 0.06
TNRC6AQ8NDV7 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC15.45■□□□□ 0.06
TNRC6AQ8NDV7 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC15.45■□□□□ 0.06
TNRC6AQ8NDV7 LINC01225-203ENST00000563550 1244 ntBASIC15.45■□□□□ 0.06
TNRC6AQ8NDV7 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
TNRC6AQ8NDV7 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
TNRC6AQ8NDV7 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TNRC6AQ8NDV7 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TNRC6AQ8NDV7 HARS-204ENST00000438307 1789 ntTSL 2 BASIC15.45■□□□□ 0.06
TNRC6AQ8NDV7 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TNRC6AQ8NDV7 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC15.45■□□□□ 0.06
TNRC6AQ8NDV7 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TNRC6AQ8NDV7 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC15.45■□□□□ 0.06
TNRC6AQ8NDV7 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
TNRC6AQ8NDV7 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC15.45■□□□□ 0.06
TNRC6AQ8NDV7 TSSK5P-201ENST00000423978 907 ntBASIC15.45■□□□□ 0.06
TNRC6AQ8NDV7 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TNRC6AQ8NDV7 COQ9-214ENST00000567933 882 ntTSL 3 BASIC15.45■□□□□ 0.06
TNRC6AQ8NDV7 AC005412.3-201ENST00000580309 715 ntBASIC15.45■□□□□ 0.06
TNRC6AQ8NDV7 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TNRC6AQ8NDV7 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC15.45■□□□□ 0.06
TNRC6AQ8NDV7 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC15.45■□□□□ 0.06
TNRC6AQ8NDV7 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC15.45■□□□□ 0.06
TNRC6AQ8NDV7 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TNRC6AQ8NDV7 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TNRC6AQ8NDV7 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
TNRC6AQ8NDV7 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
TNRC6AQ8NDV7 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TNRC6AQ8NDV7 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TNRC6AQ8NDV7 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
TNRC6AQ8NDV7 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC15.44■□□□□ 0.06
TNRC6AQ8NDV7 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
TNRC6AQ8NDV7 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TNRC6AQ8NDV7 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TNRC6AQ8NDV7 BASP1P1-201ENST00000430708 665 ntBASIC15.44■□□□□ 0.06
TNRC6AQ8NDV7 SERBP1P5-201ENST00000510079 1181 ntBASIC15.44■□□□□ 0.06
TNRC6AQ8NDV7 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
TNRC6AQ8NDV7 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TNRC6AQ8NDV7 AL158211.3-201ENST00000607385 239 ntBASIC15.44■□□□□ 0.06
TNRC6AQ8NDV7 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
TNRC6AQ8NDV7 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TNRC6AQ8NDV7 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC15.44■□□□□ 0.06
TNRC6AQ8NDV7 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TNRC6AQ8NDV7 AC067852.2-201ENST00000590513 2313 ntBASIC15.44■□□□□ 0.06
TNRC6AQ8NDV7 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TNRC6AQ8NDV7 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC15.44■□□□□ 0.06
TNRC6AQ8NDV7 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC15.44■□□□□ 0.06
TNRC6AQ8NDV7 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC15.44■□□□□ 0.06
TNRC6AQ8NDV7 AC063926.2-201ENST00000623766 1308 ntBASIC15.44■□□□□ 0.06
TNRC6AQ8NDV7 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TNRC6AQ8NDV7 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC15.44■□□□□ 0.06
TNRC6AQ8NDV7 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
TNRC6AQ8NDV7 LETM1P2-201ENST00000597330 2178 ntBASIC15.44■□□□□ 0.06
TNRC6AQ8NDV7 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
TNRC6AQ8NDV7 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC15.44■□□□□ 0.06
TNRC6AQ8NDV7 TERF1P3-201ENST00000505638 1227 ntBASIC15.44■□□□□ 0.06
TNRC6AQ8NDV7 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC15.44■□□□□ 0.06
TNRC6AQ8NDV7 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC15.44■□□□□ 0.06
TNRC6AQ8NDV7 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
TNRC6AQ8NDV7 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TNRC6AQ8NDV7 AC010336.2-201ENST00000564226 506 ntBASIC15.44■□□□□ 0.06
TNRC6AQ8NDV7 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms