Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 BNIP3P29-201ENST00000598302 571 ntBASIC14.18□□□□□ -0.14
CCDC168Q8NDH2 AC011447.5-201ENST00000616168 564 ntBASIC14.18□□□□□ -0.14
CCDC168Q8NDH2 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC14.18□□□□□ -0.14
CCDC168Q8NDH2 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CCDC168Q8NDH2 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC14.18□□□□□ -0.14
CCDC168Q8NDH2 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC14.18□□□□□ -0.14
CCDC168Q8NDH2 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CCDC168Q8NDH2 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCDC168Q8NDH2 PDIA3P1-201ENST00000471856 1510 ntBASIC14.17□□□□□ -0.14
CCDC168Q8NDH2 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CCDC168Q8NDH2 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC14.17□□□□□ -0.14
CCDC168Q8NDH2 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
CCDC168Q8NDH2 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CCDC168Q8NDH2 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCDC168Q8NDH2 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCDC168Q8NDH2 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CCDC168Q8NDH2 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CCDC168Q8NDH2 AC011495.1-201ENST00000498085 584 ntBASIC14.17□□□□□ -0.14
CCDC168Q8NDH2 MTRF1LP2-201ENST00000506027 1122 ntBASIC14.17□□□□□ -0.14
CCDC168Q8NDH2 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC14.17□□□□□ -0.14
CCDC168Q8NDH2 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC14.17□□□□□ -0.14
CCDC168Q8NDH2 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC14.17□□□□□ -0.14
CCDC168Q8NDH2 AC007431.3-201ENST00000623221 587 ntBASIC14.17□□□□□ -0.14
CCDC168Q8NDH2 RETN-203ENST00000629642 400 ntTSL 5 BASIC14.17□□□□□ -0.14
CCDC168Q8NDH2 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC14.17□□□□□ -0.14
CCDC168Q8NDH2 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
CCDC168Q8NDH2 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CCDC168Q8NDH2 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC14.17□□□□□ -0.14
CCDC168Q8NDH2 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCDC168Q8NDH2 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCDC168Q8NDH2 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCDC168Q8NDH2 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
CCDC168Q8NDH2 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
CCDC168Q8NDH2 AL020996.1-203ENST00000536896 2307 ntBASIC14.17□□□□□ -0.14
CCDC168Q8NDH2 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC14.17□□□□□ -0.14
CCDC168Q8NDH2 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCDC168Q8NDH2 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CCDC168Q8NDH2 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC14.17□□□□□ -0.14
CCDC168Q8NDH2 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC14.17□□□□□ -0.14
CCDC168Q8NDH2 AC099548.2-209ENST00000480264 625 ntBASIC14.17□□□□□ -0.14
CCDC168Q8NDH2 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC14.17□□□□□ -0.14
CCDC168Q8NDH2 WASH4P-201ENST00000564273 1246 ntBASIC14.17□□□□□ -0.14
CCDC168Q8NDH2 PRR29-204ENST00000577953 565 ntTSL 4 BASIC14.17□□□□□ -0.14
CCDC168Q8NDH2 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC14.17□□□□□ -0.14
CCDC168Q8NDH2 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
CCDC168Q8NDH2 WNT11-204ENST00000621122 789 ntTSL 5 BASIC14.17□□□□□ -0.14
CCDC168Q8NDH2 AC012569.1-201ENST00000591191 1524 ntBASIC14.17□□□□□ -0.14
CCDC168Q8NDH2 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CCDC168Q8NDH2 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCDC168Q8NDH2 HNRNPRP1-201ENST00000453465 1695 ntBASIC14.16□□□□□ -0.14
CCDC168Q8NDH2 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCDC168Q8NDH2 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCDC168Q8NDH2 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCDC168Q8NDH2 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CCDC168Q8NDH2 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCDC168Q8NDH2 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CCDC168Q8NDH2 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC14.16□□□□□ -0.14
CCDC168Q8NDH2 KRT223P-202ENST00000449164 1292 ntBASIC14.16□□□□□ -0.14
CCDC168Q8NDH2 AC002558.1-201ENST00000488906 803 ntBASIC14.16□□□□□ -0.14
CCDC168Q8NDH2 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CCDC168Q8NDH2 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC14.16□□□□□ -0.14
CCDC168Q8NDH2 AC005412.3-201ENST00000580309 715 ntBASIC14.16□□□□□ -0.14
CCDC168Q8NDH2 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCDC168Q8NDH2 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CCDC168Q8NDH2 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCDC168Q8NDH2 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC14.16□□□□□ -0.14
CCDC168Q8NDH2 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCDC168Q8NDH2 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCDC168Q8NDH2 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC14.16□□□□□ -0.14
CCDC168Q8NDH2 RNU1-129P-201ENST00000384064 167 ntBASIC14.16□□□□□ -0.14
CCDC168Q8NDH2 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC14.16□□□□□ -0.14
CCDC168Q8NDH2 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC14.16□□□□□ -0.14
CCDC168Q8NDH2 AL353705.2-201ENST00000428243 662 ntBASIC14.16□□□□□ -0.14
CCDC168Q8NDH2 U1.21-201ENST00000580816 167 ntBASIC14.16□□□□□ -0.14
CCDC168Q8NDH2 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCDC168Q8NDH2 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCDC168Q8NDH2 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCDC168Q8NDH2 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCDC168Q8NDH2 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCDC168Q8NDH2 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCDC168Q8NDH2 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCDC168Q8NDH2 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
CCDC168Q8NDH2 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCDC168Q8NDH2 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCDC168Q8NDH2 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC14.15□□□□□ -0.14
CCDC168Q8NDH2 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CCDC168Q8NDH2 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
CCDC168Q8NDH2 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CCDC168Q8NDH2 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCDC168Q8NDH2 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCDC168Q8NDH2 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
CCDC168Q8NDH2 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCDC168Q8NDH2 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CCDC168Q8NDH2 TPI1-206ENST00000488464 791 ntTSL 5 BASIC14.15□□□□□ -0.14
CCDC168Q8NDH2 ZNF890P-202ENST00000530367 1156 ntBASIC14.15□□□□□ -0.14
CCDC168Q8NDH2 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCDC168Q8NDH2 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
CCDC168Q8NDH2 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
CCDC168Q8NDH2 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCDC168Q8NDH2 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms