Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
PDS5AQ29RF7 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PDS5AQ29RF7 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
PDS5AQ29RF7 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
PDS5AQ29RF7 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PDS5AQ29RF7 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
PDS5AQ29RF7 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PDS5AQ29RF7 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
PDS5AQ29RF7 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
PDS5AQ29RF7 FST-202ENST00000396947 2538 ntTSL 5 BASIC20.35■□□□□ 0.85
PDS5AQ29RF7 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC20.35■□□□□ 0.85
PDS5AQ29RF7 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC20.35■□□□□ 0.85
PDS5AQ29RF7 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PDS5AQ29RF7 AL645939.2-201ENST00000427340 991 ntBASIC20.35■□□□□ 0.85
PDS5AQ29RF7 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC20.35■□□□□ 0.85
PDS5AQ29RF7 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC20.35■□□□□ 0.85
PDS5AQ29RF7 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC20.35■□□□□ 0.85
PDS5AQ29RF7 LINC01225-203ENST00000563550 1244 ntBASIC20.35■□□□□ 0.85
PDS5AQ29RF7 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC20.35■□□□□ 0.85
PDS5AQ29RF7 AC015911.4-201ENST00000588022 1070 ntBASIC20.35■□□□□ 0.85
PDS5AQ29RF7 AL355385.1-201ENST00000606123 409 ntBASIC20.35■□□□□ 0.85
PDS5AQ29RF7 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC20.35■□□□□ 0.85
PDS5AQ29RF7 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC20.35■□□□□ 0.85
PDS5AQ29RF7 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC20.35■□□□□ 0.85
PDS5AQ29RF7 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PDS5AQ29RF7 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
PDS5AQ29RF7 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PDS5AQ29RF7 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PDS5AQ29RF7 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
PDS5AQ29RF7 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
PDS5AQ29RF7 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC20.35■□□□□ 0.85
PDS5AQ29RF7 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC20.35■□□□□ 0.85
PDS5AQ29RF7 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
PDS5AQ29RF7 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC20.35■□□□□ 0.85
PDS5AQ29RF7 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PDS5AQ29RF7 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PDS5AQ29RF7 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC20.34■□□□□ 0.85
PDS5AQ29RF7 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC20.34■□□□□ 0.85
PDS5AQ29RF7 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
PDS5AQ29RF7 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC20.34■□□□□ 0.85
PDS5AQ29RF7 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
PDS5AQ29RF7 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PDS5AQ29RF7 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC20.34■□□□□ 0.85
PDS5AQ29RF7 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC20.34■□□□□ 0.85
PDS5AQ29RF7 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC20.34■□□□□ 0.85
PDS5AQ29RF7 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC20.34■□□□□ 0.85
PDS5AQ29RF7 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC20.34■□□□□ 0.85
PDS5AQ29RF7 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC20.34■□□□□ 0.85
PDS5AQ29RF7 CYMP-203ENST00000474680 1263 ntBASIC20.34■□□□□ 0.85
PDS5AQ29RF7 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC20.34■□□□□ 0.85
PDS5AQ29RF7 RPL28-205ENST00000558131 444 ntTSL 5 BASIC20.34■□□□□ 0.85
PDS5AQ29RF7 KRT8P23-201ENST00000560090 1207 ntBASIC20.34■□□□□ 0.85
PDS5AQ29RF7 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC20.34■□□□□ 0.85
PDS5AQ29RF7 SIGLEC29P-201ENST00000599873 1114 ntBASIC20.34■□□□□ 0.85
PDS5AQ29RF7 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
PDS5AQ29RF7 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PDS5AQ29RF7 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PDS5AQ29RF7 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PDS5AQ29RF7 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PDS5AQ29RF7 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC20.34■□□□□ 0.85
PDS5AQ29RF7 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC20.34■□□□□ 0.85
PDS5AQ29RF7 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
PDS5AQ29RF7 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
PDS5AQ29RF7 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PDS5AQ29RF7 PP12613-201ENST00000424958 2230 ntBASIC20.34■□□□□ 0.85
PDS5AQ29RF7 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC20.33■□□□□ 0.85
PDS5AQ29RF7 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
PDS5AQ29RF7 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC20.33■□□□□ 0.85
PDS5AQ29RF7 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC20.33■□□□□ 0.85
PDS5AQ29RF7 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
PDS5AQ29RF7 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PDS5AQ29RF7 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC20.33■□□□□ 0.85
PDS5AQ29RF7 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC20.33■□□□□ 0.85
PDS5AQ29RF7 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PDS5AQ29RF7 PNMT-202ENST00000394246 821 ntTSL 2 BASIC20.33■□□□□ 0.85
PDS5AQ29RF7 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC20.33■□□□□ 0.85
PDS5AQ29RF7 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC20.33■□□□□ 0.85
PDS5AQ29RF7 SPCS2P4-201ENST00000436160 681 ntBASIC20.33■□□□□ 0.85
PDS5AQ29RF7 STARD13-205ENST00000439831 945 ntTSL 2 BASIC20.33■□□□□ 0.85
PDS5AQ29RF7 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
PDS5AQ29RF7 AC069335.1-201ENST00000489972 472 ntBASIC20.33■□□□□ 0.85
PDS5AQ29RF7 TSFM-210ENST00000550559 897 ntTSL 5 BASIC20.33■□□□□ 0.85
PDS5AQ29RF7 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PDS5AQ29RF7 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PDS5AQ29RF7 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PDS5AQ29RF7 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
PDS5AQ29RF7 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
PDS5AQ29RF7 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC20.33■□□□□ 0.85
PDS5AQ29RF7 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PDS5AQ29RF7 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC20.33■□□□□ 0.84
PDS5AQ29RF7 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
PDS5AQ29RF7 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC20.33■□□□□ 0.84
PDS5AQ29RF7 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
PDS5AQ29RF7 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
PDS5AQ29RF7 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
PDS5AQ29RF7 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC20.33■□□□□ 0.84
PDS5AQ29RF7 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
PDS5AQ29RF7 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
PDS5AQ29RF7 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC20.33■□□□□ 0.84
PDS5AQ29RF7 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms