Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC21.04■□□□□ 0.96
NUP98P52948 PP14571-201ENST00000404327 934 ntTSL 2 BASIC21.04■□□□□ 0.96
NUP98P52948 CRB3P1-201ENST00000449338 276 ntBASIC21.04■□□□□ 0.96
NUP98P52948 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC21.04■□□□□ 0.96
NUP98P52948 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC21.04■□□□□ 0.96
NUP98P52948 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC21.04■□□□□ 0.96
NUP98P52948 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC21.04■□□□□ 0.96
NUP98P52948 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC21.04■□□□□ 0.96
NUP98P52948 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC21.04■□□□□ 0.96
NUP98P52948 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
NUP98P52948 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
NUP98P52948 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
NUP98P52948 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
NUP98P52948 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
NUP98P52948 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC21.04■□□□□ 0.96
NUP98P52948 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC21.04■□□□□ 0.96
NUP98P52948 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NUP98P52948 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NUP98P52948 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
NUP98P52948 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
NUP98P52948 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
NUP98P52948 IGHV3-42-201ENST00000520410 361 ntBASIC21.04■□□□□ 0.96
NUP98P52948 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC21.04■□□□□ 0.96
NUP98P52948 POLD4-211ENST00000539074 714 ntTSL 3 BASIC21.04■□□□□ 0.96
NUP98P52948 RBM7-207ENST00000544582 692 ntTSL 3 BASIC21.04■□□□□ 0.96
NUP98P52948 AC239800.4-201ENST00000603712 296 ntBASIC21.04■□□□□ 0.96
NUP98P52948 AC007967.4-201ENST00000614700 386 ntBASIC21.04■□□□□ 0.96
NUP98P52948 AL138828.2-201ENST00000615812 383 ntBASIC21.04■□□□□ 0.96
NUP98P52948 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NUP98P52948 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NUP98P52948 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC21.03■□□□□ 0.96
NUP98P52948 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
NUP98P52948 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
NUP98P52948 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
NUP98P52948 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
NUP98P52948 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC21.03■□□□□ 0.96
NUP98P52948 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
NUP98P52948 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
NUP98P52948 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
NUP98P52948 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
NUP98P52948 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC21.03■□□□□ 0.96
NUP98P52948 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC21.03■□□□□ 0.96
NUP98P52948 PNKD-204ENST00000436005 978 ntTSL 5 BASIC21.03■□□□□ 0.96
NUP98P52948 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC21.03■□□□□ 0.96
NUP98P52948 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
NUP98P52948 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC21.03■□□□□ 0.96
NUP98P52948 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC21.03■□□□□ 0.96
NUP98P52948 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC21.03■□□□□ 0.96
NUP98P52948 NOC2LP2-201ENST00000407594 1944 ntBASIC21.03■□□□□ 0.96
NUP98P52948 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC21.03■□□□□ 0.96
NUP98P52948 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
NUP98P52948 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
NUP98P52948 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
NUP98P52948 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
NUP98P52948 AC241585.1-201ENST00000433527 519 ntBASIC21.02■□□□□ 0.96
NUP98P52948 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC21.02■□□□□ 0.96
NUP98P52948 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC21.02■□□□□ 0.96
NUP98P52948 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC21.02■□□□□ 0.96
NUP98P52948 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC21.02■□□□□ 0.96
NUP98P52948 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC21.02■□□□□ 0.96
NUP98P52948 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
NUP98P52948 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
NUP98P52948 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC21.02■□□□□ 0.96
NUP98P52948 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
NUP98P52948 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
NUP98P52948 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.95
NUP98P52948 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
NUP98P52948 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC21.02■□□□□ 0.95
NUP98P52948 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
NUP98P52948 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC21.01■□□□□ 0.95
NUP98P52948 OARD1-208ENST00000469104 704 ntTSL 2 BASIC21.01■□□□□ 0.95
NUP98P52948 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC21.01■□□□□ 0.95
NUP98P52948 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC21.01■□□□□ 0.95
NUP98P52948 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC21.01■□□□□ 0.95
NUP98P52948 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC21.01■□□□□ 0.95
NUP98P52948 AC073592.8-201ENST00000624126 511 ntBASIC21.01■□□□□ 0.95
NUP98P52948 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC21.01■□□□□ 0.95
NUP98P52948 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
NUP98P52948 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
NUP98P52948 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC21.01■□□□□ 0.95
NUP98P52948 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
NUP98P52948 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
NUP98P52948 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
NUP98P52948 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
NUP98P52948 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC21.01■□□□□ 0.95
NUP98P52948 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NUP98P52948 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
NUP98P52948 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC21.01■□□□□ 0.95
NUP98P52948 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC21.01■□□□□ 0.95
NUP98P52948 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC21.01■□□□□ 0.95
NUP98P52948 KRT18P34-201ENST00000488218 1270 ntBASIC21.01■□□□□ 0.95
NUP98P52948 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC21.01■□□□□ 0.95
NUP98P52948 SPDYE12P-201ENST00000618416 771 ntBASIC21.01■□□□□ 0.95
NUP98P52948 AC004840.1-201ENST00000636359 365 ntBASIC21.01■□□□□ 0.95
NUP98P52948 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NUP98P52948 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NUP98P52948 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
NUP98P52948 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
NUP98P52948 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NUP98P52948 TUBB8P12-201ENST00000308911 1335 ntBASIC21■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms