Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
CX3CR1P49238 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC15.08■□□□□ 0
CX3CR1P49238 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC15.08■□□□□ 0
CX3CR1P49238 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
CX3CR1P49238 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC15.07■□□□□ 0
CX3CR1P49238 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC15.07■□□□□ 0
CX3CR1P49238 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC15.07■□□□□ 0
CX3CR1P49238 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC15.07■□□□□ 0
CX3CR1P49238 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC15.07■□□□□ 0
CX3CR1P49238 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC15.07■□□□□ 0
CX3CR1P49238 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CX3CR1P49238 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CX3CR1P49238 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
CX3CR1P49238 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
CX3CR1P49238 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC15.07■□□□□ 0
CX3CR1P49238 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC15.07■□□□□ 0
CX3CR1P49238 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC15.07■□□□□ 0
CX3CR1P49238 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CX3CR1P49238 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC15.07■□□□□ 0
CX3CR1P49238 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC15.07■□□□□ 0
CX3CR1P49238 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC15.07■□□□□ 0
CX3CR1P49238 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CX3CR1P49238 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC15.07■□□□□ 0
CX3CR1P49238 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC15.07■□□□□ 0
CX3CR1P49238 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC15.07■□□□□ 0
CX3CR1P49238 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC15.07■□□□□ 0
CX3CR1P49238 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CX3CR1P49238 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC15.07■□□□□ 0
CX3CR1P49238 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC15.07■□□□□ 0
CX3CR1P49238 FUOM-202ENST00000368551 628 ntTSL 3 BASIC15.07■□□□□ 0
CX3CR1P49238 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
CX3CR1P49238 THAP5-204ENST00000438865 868 ntTSL 2 BASIC15.07■□□□□ 0
CX3CR1P49238 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC15.07■□□□□ 0
CX3CR1P49238 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC15.07■□□□□ 0
CX3CR1P49238 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC15.07■□□□□ 0
CX3CR1P49238 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC15.07■□□□□ 0
CX3CR1P49238 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC15.07■□□□□ 0
CX3CR1P49238 MPI-205ENST00000562606 1052 ntTSL 3 BASIC15.07■□□□□ 0
CX3CR1P49238 MIR3180-1-201ENST00000580374 94 ntBASIC15.07■□□□□ 0
CX3CR1P49238 MIR3180-3-201ENST00000584616 94 ntBASIC15.07■□□□□ 0
CX3CR1P49238 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC15.07■□□□□ 0
CX3CR1P49238 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
CX3CR1P49238 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC15.07■□□□□ 0
CX3CR1P49238 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC15.07■□□□□ 0
CX3CR1P49238 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
CX3CR1P49238 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CX3CR1P49238 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC15.07■□□□□ 0
CX3CR1P49238 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
CX3CR1P49238 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
CX3CR1P49238 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC15.07■□□□□ 0
CX3CR1P49238 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
CX3CR1P49238 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC15.07■□□□□ 0
CX3CR1P49238 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
CX3CR1P49238 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
CX3CR1P49238 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC15.07■□□□□ 0
CX3CR1P49238 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC15.07■□□□□ 0
CX3CR1P49238 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
CX3CR1P49238 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CX3CR1P49238 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC15.06■□□□□ 0
CX3CR1P49238 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CX3CR1P49238 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CX3CR1P49238 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC15.06■□□□□ 0
CX3CR1P49238 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CX3CR1P49238 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
CX3CR1P49238 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC15.06■□□□□ 0
CX3CR1P49238 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC15.06■□□□□ 0
CX3CR1P49238 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC15.06■□□□□ 0
CX3CR1P49238 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CX3CR1P49238 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
CX3CR1P49238 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC15.06■□□□□ 0
CX3CR1P49238 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC15.06■□□□□ 0
CX3CR1P49238 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC15.06■□□□□ 0
CX3CR1P49238 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC15.06■□□□□ 0
CX3CR1P49238 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
CX3CR1P49238 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC15.06■□□□□ 0
CX3CR1P49238 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
CX3CR1P49238 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CX3CR1P49238 AC092068.3-201ENST00000587894 2016 ntBASIC15.06■□□□□ 0
CX3CR1P49238 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC15.06■□□□□ 0
CX3CR1P49238 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC15.06■□□□□ 0
CX3CR1P49238 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC15.06■□□□□ 0
CX3CR1P49238 COPS8-203ENST00000409334 794 ntTSL 5 BASIC15.06■□□□□ 0
CX3CR1P49238 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
CX3CR1P49238 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC15.06■□□□□ 0
CX3CR1P49238 SRP19-202ENST00000445150 833 ntTSL 2 BASIC15.06■□□□□ 0
CX3CR1P49238 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC15.06■□□□□ 0
CX3CR1P49238 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC15.06■□□□□ 0
CX3CR1P49238 KRT18P35-201ENST00000510488 1269 ntBASIC15.06■□□□□ 0
CX3CR1P49238 AC092329.2-201ENST00000598402 547 ntBASIC15.06■□□□□ 0
CX3CR1P49238 AC099336.1-202ENST00000602961 463 ntBASIC15.06■□□□□ 0
CX3CR1P49238 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC15.06■□□□□ 0
CX3CR1P49238 AC092119.3-201ENST00000612618 583 ntBASIC15.06■□□□□ 0
CX3CR1P49238 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC15.06■□□□□ 0
CX3CR1P49238 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC15.06■□□□□ 0
CX3CR1P49238 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CX3CR1P49238 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CX3CR1P49238 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CX3CR1P49238 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
CX3CR1P49238 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CX3CR1P49238 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC15.06■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 70.8 ms