Protein–RNA interactions for Protein: P35716

SOX11, Transcription factor SOX-11, humanhuman

Predictions only

Length 441 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX11P35716 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SOX11P35716 FUK-207ENST00000571514 3054 ntTSL 2 BASIC16.79■□□□□ 0.28
SOX11P35716 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
SOX11P35716 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC16.79■□□□□ 0.28
SOX11P35716 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
SOX11P35716 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC16.79■□□□□ 0.28
SOX11P35716 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SOX11P35716 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SOX11P35716 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
SOX11P35716 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC16.79■□□□□ 0.28
SOX11P35716 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SOX11P35716 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC16.79■□□□□ 0.28
SOX11P35716 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
SOX11P35716 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
SOX11P35716 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SOX11P35716 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC16.79■□□□□ 0.28
SOX11P35716 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC16.79■□□□□ 0.28
SOX11P35716 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
SOX11P35716 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SOX11P35716 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
SOX11P35716 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
SOX11P35716 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SOX11P35716 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SOX11P35716 AC017007.3-201ENST00000479865 435 ntBASIC16.79■□□□□ 0.28
SOX11P35716 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SOX11P35716 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
SOX11P35716 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
SOX11P35716 ABR-204ENST00000543210 1049 ntTSL 2 BASIC16.79■□□□□ 0.28
SOX11P35716 ABR-217ENST00000572441 563 ntTSL 4 BASIC16.79■□□□□ 0.28
SOX11P35716 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SOX11P35716 AC104692.2-201ENST00000603054 253 ntBASIC16.79■□□□□ 0.28
SOX11P35716 AL031008.1-201ENST00000619963 541 ntBASIC16.79■□□□□ 0.28
SOX11P35716 ANKRD20A8P-203ENST00000641373 517 ntBASIC16.79■□□□□ 0.28
SOX11P35716 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SOX11P35716 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
SOX11P35716 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC16.79■□□□□ 0.28
SOX11P35716 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SOX11P35716 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
SOX11P35716 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SOX11P35716 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SOX11P35716 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
SOX11P35716 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SOX11P35716 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC16.78■□□□□ 0.28
SOX11P35716 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC16.78■□□□□ 0.28
SOX11P35716 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC16.78■□□□□ 0.28
SOX11P35716 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC16.78■□□□□ 0.28
SOX11P35716 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SOX11P35716 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
SOX11P35716 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
SOX11P35716 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SOX11P35716 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SOX11P35716 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
SOX11P35716 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC16.78■□□□□ 0.28
SOX11P35716 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC16.78■□□□□ 0.28
SOX11P35716 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC16.78■□□□□ 0.28
SOX11P35716 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
SOX11P35716 TPM1-218ENST00000559281 851 ntTSL 5 BASIC16.78■□□□□ 0.28
SOX11P35716 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SOX11P35716 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC16.78■□□□□ 0.28
SOX11P35716 AC011840.4-201ENST00000578471 627 ntBASIC16.78■□□□□ 0.28
SOX11P35716 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SOX11P35716 CCNC-219ENST00000627680 896 ntTSL 5 BASIC16.78■□□□□ 0.28
SOX11P35716 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SOX11P35716 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SOX11P35716 AC105020.1-201ENST00000435356 2205 ntBASIC16.78■□□□□ 0.28
SOX11P35716 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
SOX11P35716 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
SOX11P35716 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SOX11P35716 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC16.78■□□□□ 0.28
SOX11P35716 HYMAI-201ENST00000635591 3347 ntBASIC16.78■□□□□ 0.28
SOX11P35716 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
SOX11P35716 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
SOX11P35716 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
SOX11P35716 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SOX11P35716 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
SOX11P35716 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC16.77■□□□□ 0.28
SOX11P35716 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC16.77■□□□□ 0.28
SOX11P35716 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SOX11P35716 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC16.77■□□□□ 0.28
SOX11P35716 FLJ38576-201ENST00000623820 2459 ntBASIC16.77■□□□□ 0.28
SOX11P35716 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
SOX11P35716 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC16.77■□□□□ 0.28
SOX11P35716 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
SOX11P35716 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SOX11P35716 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
SOX11P35716 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC16.77■□□□□ 0.28
SOX11P35716 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
SOX11P35716 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SOX11P35716 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SOX11P35716 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SOX11P35716 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SOX11P35716 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
SOX11P35716 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
SOX11P35716 STK33P1-201ENST00000423835 1218 ntBASIC16.77■□□□□ 0.28
SOX11P35716 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC16.77■□□□□ 0.28
SOX11P35716 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC16.77■□□□□ 0.28
SOX11P35716 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC16.77■□□□□ 0.28
SOX11P35716 BMF-207ENST00000559701 630 ntTSL 3 BASIC16.77■□□□□ 0.28
SOX11P35716 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC16.77■□□□□ 0.28
SOX11P35716 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC16.77■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms