Protein–RNA interactions for Protein: P25054

APC, Adenomatous polyposis coli protein, humanhuman

Predictions only

Length 2,843 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APCP25054 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC14.16□□□□□ -0.14
APCP25054 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC14.16□□□□□ -0.14
APCP25054 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC14.16□□□□□ -0.14
APCP25054 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
APCP25054 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
APCP25054 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC14.15□□□□□ -0.14
APCP25054 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC14.15□□□□□ -0.14
APCP25054 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC14.15□□□□□ -0.14
APCP25054 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
APCP25054 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
APCP25054 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC14.15□□□□□ -0.14
APCP25054 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
APCP25054 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
APCP25054 RN7SL219P-201ENST00000582872 296 ntBASIC14.15□□□□□ -0.14
APCP25054 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC14.15□□□□□ -0.14
APCP25054 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
APCP25054 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC14.15□□□□□ -0.14
APCP25054 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
APCP25054 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
APCP25054 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
APCP25054 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
APCP25054 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
APCP25054 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
APCP25054 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC14.15□□□□□ -0.14
APCP25054 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
APCP25054 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC14.15□□□□□ -0.14
APCP25054 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
APCP25054 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
APCP25054 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
APCP25054 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
APCP25054 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
APCP25054 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
APCP25054 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
APCP25054 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC14.15□□□□□ -0.14
APCP25054 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
APCP25054 AC055876.2-201ENST00000531834 546 ntBASIC14.15□□□□□ -0.14
APCP25054 TEX48-202ENST00000612244 662 ntTSL 3 BASIC14.15□□□□□ -0.14
APCP25054 AL021578.1-201ENST00000613646 709 ntBASIC14.15□□□□□ -0.14
APCP25054 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
APCP25054 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC14.15□□□□□ -0.14
APCP25054 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
APCP25054 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
APCP25054 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
APCP25054 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC14.15□□□□□ -0.14
APCP25054 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
APCP25054 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
APCP25054 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
APCP25054 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC14.14□□□□□ -0.15
APCP25054 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC14.14□□□□□ -0.15
APCP25054 AC010319.3-201ENST00000597028 470 ntBASIC14.14□□□□□ -0.15
APCP25054 RN7SL828P-201ENST00000607615 303 ntBASIC14.14□□□□□ -0.15
APCP25054 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
APCP25054 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC14.14□□□□□ -0.15
APCP25054 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
APCP25054 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC14.14□□□□□ -0.15
APCP25054 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
APCP25054 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
APCP25054 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
APCP25054 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC14.14□□□□□ -0.15
APCP25054 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC14.14□□□□□ -0.15
APCP25054 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC14.14□□□□□ -0.15
APCP25054 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC14.14□□□□□ -0.15
APCP25054 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC14.14□□□□□ -0.15
APCP25054 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
APCP25054 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
APCP25054 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
APCP25054 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
APCP25054 MIR1247-201ENST00000408206 136 ntBASIC14.14□□□□□ -0.15
APCP25054 FXNP2-201ENST00000411625 547 ntBASIC14.14□□□□□ -0.15
APCP25054 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC14.14□□□□□ -0.15
APCP25054 CTBP2P5-201ENST00000454986 1264 ntBASIC14.14□□□□□ -0.15
APCP25054 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC14.14□□□□□ -0.15
APCP25054 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC14.14□□□□□ -0.15
APCP25054 BTNL10-201ENST00000595971 695 ntBASIC14.14□□□□□ -0.15
APCP25054 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC14.14□□□□□ -0.15
APCP25054 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
APCP25054 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
APCP25054 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
APCP25054 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
APCP25054 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
APCP25054 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
APCP25054 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC14.14□□□□□ -0.15
APCP25054 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC14.14□□□□□ -0.15
APCP25054 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
APCP25054 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC14.14□□□□□ -0.15
APCP25054 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
APCP25054 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC14.14□□□□□ -0.15
APCP25054 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
APCP25054 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC14.14□□□□□ -0.15
APCP25054 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
APCP25054 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC14.14□□□□□ -0.15
APCP25054 AC093525.8-201ENST00000624099 1342 ntBASIC14.14□□□□□ -0.15
APCP25054 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
APCP25054 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
APCP25054 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
APCP25054 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
APCP25054 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC14.14□□□□□ -0.15
APCP25054 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
APCP25054 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC14.14□□□□□ -0.15
APCP25054 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms