Protein–RNA interactions for Protein: P23634

ATP2B4, Plasma membrane calcium-transporting ATPase 4, humanhuman

Predictions only

Length 1,241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B4P23634 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
ATP2B4P23634 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
ATP2B4P23634 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ATP2B4P23634 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ATP2B4P23634 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
ATP2B4P23634 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ATP2B4P23634 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
ATP2B4P23634 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC20.58■□□□□ 0.89
ATP2B4P23634 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ATP2B4P23634 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ATP2B4P23634 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
ATP2B4P23634 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ATP2B4P23634 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
ATP2B4P23634 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC20.58■□□□□ 0.89
ATP2B4P23634 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ATP2B4P23634 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
ATP2B4P23634 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
ATP2B4P23634 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC20.58■□□□□ 0.89
ATP2B4P23634 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC20.58■□□□□ 0.89
ATP2B4P23634 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC20.58■□□□□ 0.89
ATP2B4P23634 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ATP2B4P23634 AL158211.3-201ENST00000607385 239 ntBASIC20.58■□□□□ 0.89
ATP2B4P23634 MIR6080-201ENST00000617359 66 ntBASIC20.58■□□□□ 0.89
ATP2B4P23634 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
ATP2B4P23634 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
ATP2B4P23634 KRT8P49-201ENST00000604166 1432 ntBASIC20.58■□□□□ 0.88
ATP2B4P23634 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
ATP2B4P23634 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
ATP2B4P23634 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
ATP2B4P23634 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC20.58■□□□□ 0.88
ATP2B4P23634 FRMD8P1-201ENST00000440433 1524 ntBASIC20.58■□□□□ 0.88
ATP2B4P23634 TPR-209ENST00000613151 2478 ntTSL 5 BASIC20.58■□□□□ 0.88
ATP2B4P23634 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC20.57■□□□□ 0.88
ATP2B4P23634 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ATP2B4P23634 AC008764.6-201ENST00000595909 2069 ntBASIC20.57■□□□□ 0.88
ATP2B4P23634 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ATP2B4P23634 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ATP2B4P23634 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
ATP2B4P23634 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
ATP2B4P23634 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC20.57■□□□□ 0.88
ATP2B4P23634 TAF8-206ENST00000472818 719 ntTSL 2 BASIC20.57■□□□□ 0.88
ATP2B4P23634 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
ATP2B4P23634 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ATP2B4P23634 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC20.57■□□□□ 0.88
ATP2B4P23634 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
ATP2B4P23634 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
ATP2B4P23634 AC116353.5-201ENST00000638148 1699 ntBASIC20.57■□□□□ 0.88
ATP2B4P23634 AL021920.2-201ENST00000624828 1351 ntBASIC20.57■□□□□ 0.88
ATP2B4P23634 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC20.57■□□□□ 0.88
ATP2B4P23634 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC20.56■□□□□ 0.88
ATP2B4P23634 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
ATP2B4P23634 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC20.56■□□□□ 0.88
ATP2B4P23634 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ATP2B4P23634 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ATP2B4P23634 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC20.56■□□□□ 0.88
ATP2B4P23634 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
ATP2B4P23634 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC20.56■□□□□ 0.88
ATP2B4P23634 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ATP2B4P23634 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC20.56■□□□□ 0.88
ATP2B4P23634 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
ATP2B4P23634 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC20.56■□□□□ 0.88
ATP2B4P23634 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ATP2B4P23634 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
ATP2B4P23634 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ATP2B4P23634 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ATP2B4P23634 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC20.56■□□□□ 0.88
ATP2B4P23634 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
ATP2B4P23634 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
ATP2B4P23634 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC20.56■□□□□ 0.88
ATP2B4P23634 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC20.56■□□□□ 0.88
ATP2B4P23634 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC20.56■□□□□ 0.88
ATP2B4P23634 HNRNPA1P40-201ENST00000426371 1278 ntBASIC20.56■□□□□ 0.88
ATP2B4P23634 TSPY16P-201ENST00000449843 468 ntBASIC20.56■□□□□ 0.88
ATP2B4P23634 AC190387.1-201ENST00000551683 408 ntBASIC20.56■□□□□ 0.88
ATP2B4P23634 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC20.56■□□□□ 0.88
ATP2B4P23634 NKG7-205ENST00000600427 520 ntTSL 3 BASIC20.56■□□□□ 0.88
ATP2B4P23634 AC239800.4-201ENST00000603712 296 ntBASIC20.56■□□□□ 0.88
ATP2B4P23634 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ATP2B4P23634 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
ATP2B4P23634 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
ATP2B4P23634 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
ATP2B4P23634 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ATP2B4P23634 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC20.56■□□□□ 0.88
ATP2B4P23634 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC20.56■□□□□ 0.88
ATP2B4P23634 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC20.55■□□□□ 0.88
ATP2B4P23634 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ATP2B4P23634 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ATP2B4P23634 CD81-202ENST00000381036 880 ntTSL 3 BASIC20.55■□□□□ 0.88
ATP2B4P23634 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC20.55■□□□□ 0.88
ATP2B4P23634 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC20.55■□□□□ 0.88
ATP2B4P23634 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC20.55■□□□□ 0.88
ATP2B4P23634 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ATP2B4P23634 PPP6R2P1-201ENST00000450880 1275 ntBASIC20.55■□□□□ 0.88
ATP2B4P23634 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC20.55■□□□□ 0.88
ATP2B4P23634 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC20.55■□□□□ 0.88
ATP2B4P23634 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ATP2B4P23634 IGHV3-42-201ENST00000520410 361 ntBASIC20.55■□□□□ 0.88
ATP2B4P23634 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC20.55■□□□□ 0.88
ATP2B4P23634 AC069120.2-201ENST00000524091 540 ntBASIC20.55■□□□□ 0.88
ATP2B4P23634 MIR4492-201ENST00000581627 80 ntBASIC20.55■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms