Protein–RNA interactions for Protein: P23396

RPS3, 40S ribosomal protein S3, humanhuman

Known RBP eCLIP

Length 243 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3P23396 CYCS-203ENST00000409764 799 ntAPPRIS P1 TSL 3 BASIC11.42□□□□□ -0.582e-10■■■□□ 15
RPS3P23396 CYCS-204ENST00000413447 498 ntTSL 311.42□□□□□ -0.582e-10■■■□□ 15
RPS3P23396 CYCS-201ENST00000305786 4098 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.082e-10■■■□□ 15
RPS3P23396 ST6GAL1-218ENST00000464827 494 ntTSL 29.74□□□□□ -0.852e-6■■■□□ 15
RPS3P23396 SSR3-204ENST00000467733 873 ntTSL 23.7□□□□□ -1.821e-8■■■□□ 15
RPS3P23396 SLC1A4-204ENST00000493121 766 ntTSL 515.37■□□□□ 0.057e-7■■■□□ 15
RPS3P23396 SLC1A4-202ENST00000471551 461 ntTSL 412.88□□□□□ -0.357e-7■■■□□ 15
RPS3P23396 PARP1-209ENST00000498787 628 ntTSL 214.49□□□□□ -0.092e-7■■■□□ 15
RPS3P23396 UGGT1-202ENST00000376723 6682 ntTSL 1 (best)14.8□□□□□ -0.041e-6■■■□□ 15
RPS3P23396 UGGT1-205ENST00000438277 3113 ntTSL 1 (best)12.44□□□□□ -0.421e-6■■■□□ 15
RPS3P23396 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.481e-6■■■□□ 15
RPS3P23396 CSTB-202ENST00000480147 2344 nt20.95■□□□□ 0.946e-8■■■□□ 15
RPS3P23396 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC16.95■□□□□ 0.36e-8■■■□□ 15
RPS3P23396 CSTB-203ENST00000639959 1855 ntTSL 515.74■□□□□ 0.116e-8■■■□□ 15
RPS3P23396 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.066e-8■■■□□ 15
RPS3P23396 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.131e-6■■■□□ 15
RPS3P23396 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.368e-7■■■□□ 15
RPS3P23396 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC17.16■□□□□ 0.348e-7■■■□□ 15
RPS3P23396 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.298e-7■■■□□ 15
RPS3P23396 LGMN-217ENST00000557609 1832 ntTSL 516.73■□□□□ 0.278e-7■■■□□ 15
RPS3P23396 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC16.22■□□□□ 0.198e-7■■■□□ 15
RPS3P23396 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 17e-9■■■□□ 15
RPS3P23396 PSMD7-206ENST00000568717 1395 ntTSL 218.83■□□□□ 0.617e-9■■■□□ 15
RPS3P23396 PSMD7-203ENST00000566015 537 ntTSL 218.19■□□□□ 0.57e-9■■■□□ 15
RPS3P23396 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC15.48■□□□□ 0.077e-9■■■□□ 15
RPS3P23396 PSMD7-205ENST00000568615 931 ntTSL 2 BASIC12.42□□□□□ -0.427e-9■■■□□ 15
RPS3P23396 YARS-207ENST00000481895 1018 ntTSL 519.5■□□□□ 0.711e-12■■■□□ 15
RPS3P23396 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.061e-12■■■□□ 15
RPS3P23396 YARS-210ENST00000616261 1167 ntTSL 5 BASIC8.81□□□□□ -11e-12■■■□□ 15
RPS3P23396 AP2M1-213ENST00000463935 580 ntTSL 210.44□□□□□ -0.744e-8■■■□□ 15
RPS3P23396 AP2M1-218ENST00000480260 582 ntTSL 29.47□□□□□ -0.894e-8■■■□□ 15
RPS3P23396 LMNA-223ENST00000515459 757 ntTSL 514.92□□□□□ -0.024e-9■■■□□ 15
RPS3P23396 AKR1C3-209ENST00000605149 1405 ntTSL 2 BASIC11.08□□□□□ -0.647e-7■■■□□ 15
RPS3P23396 AKR1C3-202ENST00000439082 972 ntAPPRIS ALT1 TSL 5 BASIC9.5□□□□□ -0.897e-7■■■□□ 15
RPS3P23396 AKR1C3-201ENST00000380554 1807 ntAPPRIS P3 TSL 1 (best) BASIC9.27□□□□□ -0.937e-7■■■□□ 15
RPS3P23396 ACTN1-216ENST00000556083 4674 ntTSL 1 (best)10.35□□□□□ -0.751e-7■■■□□ 15
RPS3P23396 TKFC-203ENST00000524953 575 ntTSL 211.36□□□□□ -0.592e-6■■■□□ 15
RPS3P23396 TKFC-220ENST00000534134 585 ntTSL 38.99□□□□□ -0.972e-6■■■□□ 15
RPS3P23396 PYCR2-203ENST00000466127 506 ntTSL 212.15□□□□□ -0.463e-8■■■□□ 15
RPS3P23396 SLC7A1-202ENST00000450494 547 ntTSL 216.45■□□□□ 0.224e-15■■■□□ 15
RPS3P23396 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC18.89■□□□□ 0.614e-7■■■□□ 15
RPS3P23396 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC16.09■□□□□ 0.174e-7■■■□□ 15
RPS3P23396 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.084e-7■■■□□ 15
RPS3P23396 MAGED1-201ENST00000326587 2747 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.432e-7■■■□□ 15
RPS3P23396 MAGED1-203ENST00000375722 2806 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.562e-7■■■□□ 15
RPS3P23396 MAGED1-209ENST00000485420 2906 ntTSL 511.53□□□□□ -0.562e-7■■■□□ 15
RPS3P23396 MAGED1-202ENST00000375695 2875 ntTSL 1 (best) BASIC11.29□□□□□ -0.62e-7■■■□□ 15
RPS3P23396 MAGED1-210ENST00000494718 5418 ntTSL 210.28□□□□□ -0.762e-7■■■□□ 15
RPS3P23396 MAGED1-204ENST00000375772 2701 ntAPPRIS P1 TSL 5 BASIC9.75□□□□□ -0.852e-7■■■□□ 15
RPS3P23396 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC19.92■□□□□ 0.782e-7■■■□□ 15
RPS3P23396 ITIH2-206ENST00000480387 573 ntTSL 38.23□□□□□ -1.092e-33■■■□□ 15
RPS3P23396 CD7-205ENST00000582480 564 ntTSL 415.6■□□□□ 0.096e-8■■■□□ 15
RPS3P23396 LRP1-201ENST00000243077 14897 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.023e-7■■■□□ 15
RPS3P23396 THBS1-206ENST00000497720 527 ntTSL 28.79□□□□□ -12e-12■■■□□ 15
RPS3P23396 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC22.91■■□□□ 1.261e-8■■■□□ 15
RPS3P23396 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC19.13■□□□□ 0.651e-8■■■□□ 15
RPS3P23396 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC18.26■□□□□ 0.511e-8■■■□□ 15
RPS3P23396 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC17.7■□□□□ 0.421e-8■■■□□ 15
RPS3P23396 NDUFA10-201ENST00000252711 4915 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.341e-8■■■□□ 15
RPS3P23396 NDUFA10-213ENST00000497536 563 ntTSL 212.91□□□□□ -0.341e-8■■■□□ 15
RPS3P23396 NDUFA10-212ENST00000485344 4509 ntTSL 211.79□□□□□ -0.521e-8■■■□□ 15
RPS3P23396 NDUFA10-207ENST00000443626 776 ntTSL 511.52□□□□□ -0.571e-8■■■□□ 15
RPS3P23396 NDUFA10-205ENST00000414580 562 ntTSL 48.89□□□□□ -0.991e-8■■■□□ 15
RPS3P23396 DCAF12-201ENST00000361264 3667 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.753e-7■■■□□ 15
RPS3P23396 DCAF12-202ENST00000396990 803 ntTSL 310.25□□□□□ -0.773e-7■■■□□ 15
RPS3P23396 UXS1-206ENST00000441952 570 ntTSL 217.79■□□□□ 0.447e-8■■■□□ 15
RPS3P23396 UXS1-208ENST00000457835 682 ntTSL 417.79■□□□□ 0.447e-8■■■□□ 15
RPS3P23396 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC16.85■□□□□ 0.292e-9■■■□□ 15
RPS3P23396 STT3A-208ENST00000526726 582 ntTSL 32.7□□□□□ -1.982e-7■■■□□ 15
RPS3P23396 BAG6-257ENST00000462875 972 ntTSL 217.31■□□□□ 0.361e-7■■■□□ 15
RPS3P23396 RNH1-216ENST00000529368 727 ntTSL 220.85■□□□□ 0.932e-6■■■□□ 15
RPS3P23396 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.517e-9■■■□□ 15
RPS3P23396 RNH1-212ENST00000527485 873 ntTSL 214.62□□□□□ -0.072e-6■■■□□ 15
RPS3P23396 RNH1-215ENST00000529306 870 ntTSL 314.44□□□□□ -0.12e-6■■■□□ 15
RPS3P23396 ACSS3-206ENST00000549175 534 ntTSL 512.07□□□□□ -0.487e-9■■■□□ 15
RPS3P23396 ACSS3-203ENST00000548058 9254 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.67e-9■■■□□ 15
RPS3P23396 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.041e-6■■■□□ 15
RPS3P23396 XPO1-206ENST00000428210 6776 ntTSL 212.87□□□□□ -0.351e-6■■■□□ 15
RPS3P23396 XPO1-203ENST00000406957 3479 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.061e-6■■■□□ 15
RPS3P23396 XPO1-202ENST00000404992 4105 ntAPPRIS P1 TSL 2 BASIC6.76□□□□□ -1.331e-6■■■□□ 15
RPS3P23396 XPO1-219ENST00000481073 3706 ntTSL 21.92□□□□□ -2.11e-6■■■□□ 15
RPS3P23396 SPARC-208ENST00000538026 576 ntTSL 58.16□□□□□ -1.11e-6■■■□□ 15
RPS3P23396 SPARC-204ENST00000521569 602 ntTSL 28.11□□□□□ -1.111e-6■■■□□ 15
RPS3P23396 HNRNPM-204ENST00000594907 1078 ntTSL 518.36■□□□□ 0.531e-16■■■□□ 15
RPS3P23396 MCM3-203ENST00000421471 1030 ntTSL 59.59□□□□□ -0.872e-14■■■□□ 15
RPS3P23396 NOLC1-204ENST00000464969 2288 ntTSL 211.29□□□□□ -0.66e-7■■■□□ 15
RPS3P23396 NOLC1-207ENST00000488254 2441 ntAPPRIS ALT1 TSL 1 (best) BASIC9.96□□□□□ -0.826e-7■■■□□ 15
RPS3P23396 NOLC1-202ENST00000405356 3967 ntTSL 1 (best) BASIC8.36□□□□□ -1.076e-7■■■□□ 15
RPS3P23396 NOLC1-209ENST00000605788 3932 ntAPPRIS P3 TSL 1 (best) BASIC8.3□□□□□ -1.086e-7■■■□□ 15
RPS3P23396 NOLC1-208ENST00000603946 3217 ntTSL 1 (best)7.89□□□□□ -1.156e-7■■■□□ 15
RPS3P23396 NOLC1-201ENST00000370007 3727 ntTSL 1 (best)7□□□□□ -1.296e-7■■■□□ 15
RPS3P23396 TMEM258-202ENST00000535042 921 ntTSL 312.89□□□□□ -0.351e-6■■■□□ 15
RPS3P23396 VAT1-203ENST00000587062 600 ntTSL 419.69■□□□□ 0.746e-9■■■□□ 14.9
RPS3P23396 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC20.58■□□□□ 0.892e-12■■■□□ 14.9
RPS3P23396 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC20.02■□□□□ 0.82e-12■■■□□ 14.9
RPS3P23396 RPS15-211ENST00000592700 1602 ntTSL 219.95■□□□□ 0.782e-12■■■□□ 14.9
RPS3P23396 RPS15-203ENST00000586096 570 ntTSL 2 BASIC18.92■□□□□ 0.622e-12■■■□□ 14.9
RPS3P23396 RPS15-207ENST00000591032 550 ntTSL 3 BASIC16.46■□□□□ 0.232e-12■■■□□ 14.9
RPS3P23396 RPS15-212ENST00000593052 629 ntTSL 2 BASIC16.46■□□□□ 0.232e-12■■■□□ 14.9
RPS3P23396 RPS15-208ENST00000591804 711 ntTSL 5 BASIC15.04■□□□□ -02e-12■■■□□ 14.9
Retrieved 100 of 24,271 protein–RNA pairs in 187.3 ms