Protein–RNA interactions for Protein: P06727

APOA4, Apolipoprotein A-IV, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA4P06727 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
APOA4P06727 SOD2-201ENST00000337404 991 ntTSL 2 BASIC17.18■□□□□ 0.34
APOA4P06727 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
APOA4P06727 ENSA-206ENST00000361631 725 ntTSL 2 BASIC17.18■□□□□ 0.34
APOA4P06727 TSPY19P-201ENST00000418461 509 ntBASIC17.18■□□□□ 0.34
APOA4P06727 TSPY18P-201ENST00000441642 509 ntBASIC17.18■□□□□ 0.34
APOA4P06727 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC17.18■□□□□ 0.34
APOA4P06727 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC17.18■□□□□ 0.34
APOA4P06727 SKP2-204ENST00000508514 821 ntTSL 3 BASIC17.18■□□□□ 0.34
APOA4P06727 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC17.18■□□□□ 0.34
APOA4P06727 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
APOA4P06727 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
APOA4P06727 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
APOA4P06727 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC17.18■□□□□ 0.34
APOA4P06727 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
APOA4P06727 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
APOA4P06727 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC17.18■□□□□ 0.34
APOA4P06727 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC17.18■□□□□ 0.34
APOA4P06727 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC17.17■□□□□ 0.34
APOA4P06727 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
APOA4P06727 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
APOA4P06727 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
APOA4P06727 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
APOA4P06727 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
APOA4P06727 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
APOA4P06727 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
APOA4P06727 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
APOA4P06727 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
APOA4P06727 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
APOA4P06727 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
APOA4P06727 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
APOA4P06727 IPPK-202ENST00000375522 882 ntTSL 3 BASIC17.17■□□□□ 0.34
APOA4P06727 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
APOA4P06727 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC17.17■□□□□ 0.34
APOA4P06727 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
APOA4P06727 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC17.17■□□□□ 0.34
APOA4P06727 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC17.17■□□□□ 0.34
APOA4P06727 PMPCAP1-201ENST00000508114 1576 ntBASIC17.17■□□□□ 0.34
APOA4P06727 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
APOA4P06727 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC17.17■□□□□ 0.34
APOA4P06727 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
APOA4P06727 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC17.17■□□□□ 0.34
APOA4P06727 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC17.17■□□□□ 0.34
APOA4P06727 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC17.17■□□□□ 0.34
APOA4P06727 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC17.17■□□□□ 0.34
APOA4P06727 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
APOA4P06727 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
APOA4P06727 AC092053.1-201ENST00000605787 1936 ntBASIC17.17■□□□□ 0.34
APOA4P06727 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
APOA4P06727 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
APOA4P06727 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
APOA4P06727 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC17.17■□□□□ 0.34
APOA4P06727 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC17.17■□□□□ 0.34
APOA4P06727 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
APOA4P06727 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC17.17■□□□□ 0.34
APOA4P06727 AC132938.5-201ENST00000624980 1813 ntBASIC17.17■□□□□ 0.34
APOA4P06727 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
APOA4P06727 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC17.16■□□□□ 0.34
APOA4P06727 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
APOA4P06727 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC17.16■□□□□ 0.34
APOA4P06727 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
APOA4P06727 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
APOA4P06727 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC17.16■□□□□ 0.34
APOA4P06727 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
APOA4P06727 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
APOA4P06727 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
APOA4P06727 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
APOA4P06727 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
APOA4P06727 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
APOA4P06727 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
APOA4P06727 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
APOA4P06727 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
APOA4P06727 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
APOA4P06727 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
APOA4P06727 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
APOA4P06727 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
APOA4P06727 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC17.16■□□□□ 0.34
APOA4P06727 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
APOA4P06727 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC17.16■□□□□ 0.34
APOA4P06727 RBSN-204ENST00000449050 903 ntTSL 2 BASIC17.16■□□□□ 0.34
APOA4P06727 AC132008.2-207ENST00000454517 770 ntBASIC17.16■□□□□ 0.34
APOA4P06727 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC17.16■□□□□ 0.34
APOA4P06727 SDHD-206ENST00000528182 754 ntTSL 3 BASIC17.16■□□□□ 0.34
APOA4P06727 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC17.16■□□□□ 0.34
APOA4P06727 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
APOA4P06727 AL732292.2-201ENST00000609649 430 ntBASIC17.16■□□□□ 0.34
APOA4P06727 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
APOA4P06727 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
APOA4P06727 AP000867.4-201ENST00000641616 219 ntBASIC17.16■□□□□ 0.34
APOA4P06727 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
APOA4P06727 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC17.16■□□□□ 0.34
APOA4P06727 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
APOA4P06727 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
APOA4P06727 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC17.16■□□□□ 0.34
APOA4P06727 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
APOA4P06727 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
APOA4P06727 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
APOA4P06727 PCDHB19P-201ENST00000570871 2371 ntBASIC17.16■□□□□ 0.34
APOA4P06727 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
APOA4P06727 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms