Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
HLA-DPB1P04440 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
HLA-DPB1P04440 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC15.43■□□□□ 0.06
HLA-DPB1P04440 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
HLA-DPB1P04440 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
HLA-DPB1P04440 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
HLA-DPB1P04440 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC15.43■□□□□ 0.06
HLA-DPB1P04440 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
HLA-DPB1P04440 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
HLA-DPB1P04440 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC15.43■□□□□ 0.06
HLA-DPB1P04440 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
HLA-DPB1P04440 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
HLA-DPB1P04440 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
HLA-DPB1P04440 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
HLA-DPB1P04440 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
HLA-DPB1P04440 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
HLA-DPB1P04440 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
HLA-DPB1P04440 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
HLA-DPB1P04440 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
HLA-DPB1P04440 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC15.43■□□□□ 0.06
HLA-DPB1P04440 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC15.43■□□□□ 0.06
HLA-DPB1P04440 DAP-202ENST00000432074 1048 ntTSL 2 BASIC15.43■□□□□ 0.06
HLA-DPB1P04440 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
HLA-DPB1P04440 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC15.43■□□□□ 0.06
HLA-DPB1P04440 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC15.43■□□□□ 0.06
HLA-DPB1P04440 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC15.43■□□□□ 0.06
HLA-DPB1P04440 RNF126P1-202ENST00000569893 925 ntBASIC15.43■□□□□ 0.06
HLA-DPB1P04440 NAA38-203ENST00000575071 553 ntTSL 2 BASIC15.43■□□□□ 0.06
HLA-DPB1P04440 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC15.43■□□□□ 0.06
HLA-DPB1P04440 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
HLA-DPB1P04440 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
HLA-DPB1P04440 KRT89P-201ENST00000620027 1478 ntBASIC15.43■□□□□ 0.06
HLA-DPB1P04440 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
HLA-DPB1P04440 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
HLA-DPB1P04440 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
HLA-DPB1P04440 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
HLA-DPB1P04440 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
HLA-DPB1P04440 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC15.43■□□□□ 0.06
HLA-DPB1P04440 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
HLA-DPB1P04440 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC15.43■□□□□ 0.06
HLA-DPB1P04440 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC15.43■□□□□ 0.06
HLA-DPB1P04440 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
HLA-DPB1P04440 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
HLA-DPB1P04440 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
HLA-DPB1P04440 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC15.43■□□□□ 0.06
HLA-DPB1P04440 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
HLA-DPB1P04440 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
HLA-DPB1P04440 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
HLA-DPB1P04440 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
HLA-DPB1P04440 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC15.43■□□□□ 0.06
HLA-DPB1P04440 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
HLA-DPB1P04440 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
HLA-DPB1P04440 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC15.42■□□□□ 0.06
HLA-DPB1P04440 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
HLA-DPB1P04440 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC15.42■□□□□ 0.06
HLA-DPB1P04440 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
HLA-DPB1P04440 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
HLA-DPB1P04440 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
HLA-DPB1P04440 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC15.42■□□□□ 0.06
HLA-DPB1P04440 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
HLA-DPB1P04440 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
HLA-DPB1P04440 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC15.42■□□□□ 0.06
HLA-DPB1P04440 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
HLA-DPB1P04440 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
HLA-DPB1P04440 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
HLA-DPB1P04440 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
HLA-DPB1P04440 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC15.42■□□□□ 0.06
HLA-DPB1P04440 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
HLA-DPB1P04440 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
HLA-DPB1P04440 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
HLA-DPB1P04440 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
HLA-DPB1P04440 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC15.42■□□□□ 0.06
HLA-DPB1P04440 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
HLA-DPB1P04440 IGHGP-201ENST00000390555 1178 ntBASIC15.42■□□□□ 0.06
HLA-DPB1P04440 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
HLA-DPB1P04440 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
HLA-DPB1P04440 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
HLA-DPB1P04440 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC15.42■□□□□ 0.06
HLA-DPB1P04440 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
HLA-DPB1P04440 PPOX-214ENST00000535223 664 ntTSL 3 BASIC15.42■□□□□ 0.06
HLA-DPB1P04440 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
HLA-DPB1P04440 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC15.42■□□□□ 0.06
HLA-DPB1P04440 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC15.42■□□□□ 0.06
HLA-DPB1P04440 AC005332.3-201ENST00000589904 676 ntBASIC15.42■□□□□ 0.06
HLA-DPB1P04440 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC15.42■□□□□ 0.06
HLA-DPB1P04440 AL445228.2-201ENST00000605589 952 ntBASIC15.42■□□□□ 0.06
HLA-DPB1P04440 NDUFV2-AS1-203ENST00000608008 779 ntBASIC15.42■□□□□ 0.06
HLA-DPB1P04440 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC15.42■□□□□ 0.06
HLA-DPB1P04440 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
HLA-DPB1P04440 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
HLA-DPB1P04440 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC15.42■□□□□ 0.06
HLA-DPB1P04440 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
HLA-DPB1P04440 Z83836.1-201ENST00000624605 1642 ntBASIC15.42■□□□□ 0.06
HLA-DPB1P04440 AC079328.2-201ENST00000561241 3354 ntBASIC15.42■□□□□ 0.06
HLA-DPB1P04440 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
HLA-DPB1P04440 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
HLA-DPB1P04440 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
HLA-DPB1P04440 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HLA-DPB1P04440 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
HLA-DPB1P04440 AC092171.3-201ENST00000610122 2651 ntBASIC15.41■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms