Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ALDH1A1P00352 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC19.31■□□□□ 0.68
ALDH1A1P00352 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ALDH1A1P00352 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
ALDH1A1P00352 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ALDH1A1P00352 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ALDH1A1P00352 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ALDH1A1P00352 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ALDH1A1P00352 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC19.3■□□□□ 0.68
ALDH1A1P00352 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ALDH1A1P00352 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ALDH1A1P00352 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.3■□□□□ 0.68
ALDH1A1P00352 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ALDH1A1P00352 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ALDH1A1P00352 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
ALDH1A1P00352 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
ALDH1A1P00352 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC19.3■□□□□ 0.68
ALDH1A1P00352 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ALDH1A1P00352 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
ALDH1A1P00352 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC19.3■□□□□ 0.68
ALDH1A1P00352 MIR4525-201ENST00000580000 75 ntBASIC19.3■□□□□ 0.68
ALDH1A1P00352 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
ALDH1A1P00352 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
ALDH1A1P00352 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ALDH1A1P00352 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ALDH1A1P00352 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC19.3■□□□□ 0.68
ALDH1A1P00352 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ALDH1A1P00352 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
ALDH1A1P00352 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ALDH1A1P00352 FLJ13224-201ENST00000313737 1514 ntBASIC19.3■□□□□ 0.68
ALDH1A1P00352 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC19.3■□□□□ 0.68
ALDH1A1P00352 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ALDH1A1P00352 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC19.3■□□□□ 0.68
ALDH1A1P00352 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.29■□□□□ 0.68
ALDH1A1P00352 AC120498.9-201ENST00000339021 3867 ntBASIC19.29■□□□□ 0.68
ALDH1A1P00352 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.29■□□□□ 0.68
ALDH1A1P00352 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
ALDH1A1P00352 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
ALDH1A1P00352 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
ALDH1A1P00352 AL023806.1-201ENST00000603994 1649 ntBASIC19.29■□□□□ 0.68
ALDH1A1P00352 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ALDH1A1P00352 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ALDH1A1P00352 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
ALDH1A1P00352 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
ALDH1A1P00352 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ALDH1A1P00352 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
ALDH1A1P00352 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
ALDH1A1P00352 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ALDH1A1P00352 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
ALDH1A1P00352 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
ALDH1A1P00352 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
ALDH1A1P00352 FAM220BP-201ENST00000377689 816 ntBASIC19.29■□□□□ 0.68
ALDH1A1P00352 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC19.29■□□□□ 0.68
ALDH1A1P00352 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
ALDH1A1P00352 SLC25A6P5-201ENST00000435663 894 ntBASIC19.29■□□□□ 0.68
ALDH1A1P00352 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
ALDH1A1P00352 DOC2GP-202ENST00000514950 1163 ntBASIC19.29■□□□□ 0.68
ALDH1A1P00352 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC19.29■□□□□ 0.68
ALDH1A1P00352 FAM8A2P-201ENST00000528813 1142 ntBASIC19.29■□□□□ 0.68
ALDH1A1P00352 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC19.29■□□□□ 0.68
ALDH1A1P00352 AP005482.1-201ENST00000563722 1273 ntBASIC19.29■□□□□ 0.68
ALDH1A1P00352 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC19.29■□□□□ 0.68
ALDH1A1P00352 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC19.29■□□□□ 0.68
ALDH1A1P00352 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC19.29■□□□□ 0.68
ALDH1A1P00352 AC099568.2-201ENST00000609194 695 ntBASIC19.29■□□□□ 0.68
ALDH1A1P00352 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ALDH1A1P00352 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
ALDH1A1P00352 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
ALDH1A1P00352 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC19.29■□□□□ 0.68
ALDH1A1P00352 CROCCP3-202ENST00000420820 1947 ntBASIC19.29■□□□□ 0.68
ALDH1A1P00352 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC19.28■□□□□ 0.68
ALDH1A1P00352 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
ALDH1A1P00352 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
ALDH1A1P00352 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ALDH1A1P00352 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC19.28■□□□□ 0.68
ALDH1A1P00352 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
ALDH1A1P00352 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ALDH1A1P00352 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
ALDH1A1P00352 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC19.28■□□□□ 0.68
ALDH1A1P00352 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ALDH1A1P00352 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ALDH1A1P00352 SPDYE19P-201ENST00000338590 713 ntBASIC19.28■□□□□ 0.68
ALDH1A1P00352 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ALDH1A1P00352 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC19.28■□□□□ 0.68
ALDH1A1P00352 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC19.28■□□□□ 0.68
ALDH1A1P00352 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC19.28■□□□□ 0.68
ALDH1A1P00352 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC19.28■□□□□ 0.68
ALDH1A1P00352 NEU3-203ENST00000529024 581 ntTSL 3 BASIC19.28■□□□□ 0.68
ALDH1A1P00352 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC19.28■□□□□ 0.68
ALDH1A1P00352 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
ALDH1A1P00352 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC19.28■□□□□ 0.68
ALDH1A1P00352 CHCHD2P3-201ENST00000603038 451 ntBASIC19.28■□□□□ 0.68
ALDH1A1P00352 SNX12-206ENST00000622259 661 ntTSL 5 BASIC19.28■□□□□ 0.68
ALDH1A1P00352 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC19.28■□□□□ 0.68
ALDH1A1P00352 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC19.28■□□□□ 0.68
ALDH1A1P00352 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
ALDH1A1P00352 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
ALDH1A1P00352 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC19.28■□□□□ 0.68
ALDH1A1P00352 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ALDH1A1P00352 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 66.7 ms