Protein–RNA interactions for Protein: O15541

RNF113A, RING finger protein 113A, humanhuman

Known RBP Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF113AO15541 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC20.47■□□□□ 0.87
RNF113AO15541 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RNF113AO15541 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
RNF113AO15541 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC20.47■□□□□ 0.87
RNF113AO15541 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC20.47■□□□□ 0.87
RNF113AO15541 TOP3BP1-201ENST00000420768 1380 ntBASIC20.46■□□□□ 0.87
RNF113AO15541 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC20.46■□□□□ 0.87
RNF113AO15541 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RNF113AO15541 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RNF113AO15541 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC20.46■□□□□ 0.87
RNF113AO15541 KRT8P49-201ENST00000604166 1432 ntBASIC20.46■□□□□ 0.87
RNF113AO15541 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RNF113AO15541 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
RNF113AO15541 MIR940-201ENST00000401276 94 ntBASIC20.46■□□□□ 0.87
RNF113AO15541 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
RNF113AO15541 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC20.46■□□□□ 0.87
RNF113AO15541 AL591424.1-201ENST00000442569 1213 ntBASIC20.46■□□□□ 0.87
RNF113AO15541 KRT18P3-201ENST00000451602 1288 ntBASIC20.46■□□□□ 0.87
RNF113AO15541 CXCL1P1-201ENST00000502804 216 ntBASIC20.46■□□□□ 0.87
RNF113AO15541 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC20.46■□□□□ 0.87
RNF113AO15541 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC20.46■□□□□ 0.87
RNF113AO15541 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC20.46■□□□□ 0.87
RNF113AO15541 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC20.46■□□□□ 0.87
RNF113AO15541 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC20.46■□□□□ 0.87
RNF113AO15541 ACTL9-202ENST00000612068 1252 ntBASIC20.46■□□□□ 0.87
RNF113AO15541 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC20.46■□□□□ 0.87
RNF113AO15541 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC20.46■□□□□ 0.87
RNF113AO15541 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RNF113AO15541 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RNF113AO15541 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
RNF113AO15541 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RNF113AO15541 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RNF113AO15541 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
RNF113AO15541 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
RNF113AO15541 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RNF113AO15541 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
RNF113AO15541 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RNF113AO15541 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RNF113AO15541 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
RNF113AO15541 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC20.45■□□□□ 0.86
RNF113AO15541 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RNF113AO15541 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RNF113AO15541 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
RNF113AO15541 PMS2P1-201ENST00000431037 1228 ntBASIC20.45■□□□□ 0.86
RNF113AO15541 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC20.45■□□□□ 0.86
RNF113AO15541 HS6ST1P1-201ENST00000481504 1234 ntBASIC20.45■□□□□ 0.86
RNF113AO15541 POLD2P1-201ENST00000511220 997 ntBASIC20.45■□□□□ 0.86
RNF113AO15541 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
RNF113AO15541 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC20.45■□□□□ 0.86
RNF113AO15541 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
RNF113AO15541 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
RNF113AO15541 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
RNF113AO15541 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
RNF113AO15541 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
RNF113AO15541 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RNF113AO15541 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC20.45■□□□□ 0.86
RNF113AO15541 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RNF113AO15541 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC20.44■□□□□ 0.86
RNF113AO15541 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC20.44■□□□□ 0.86
RNF113AO15541 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
RNF113AO15541 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC20.44■□□□□ 0.86
RNF113AO15541 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RNF113AO15541 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
RNF113AO15541 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC20.44■□□□□ 0.86
RNF113AO15541 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC20.44■□□□□ 0.86
RNF113AO15541 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
RNF113AO15541 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RNF113AO15541 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RNF113AO15541 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
RNF113AO15541 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RNF113AO15541 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
RNF113AO15541 BEX3-201ENST00000361298 921 ntTSL 2 BASIC20.44■□□□□ 0.86
RNF113AO15541 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC20.44■□□□□ 0.86
RNF113AO15541 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC20.44■□□□□ 0.86
RNF113AO15541 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC20.44■□□□□ 0.86
RNF113AO15541 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC20.44■□□□□ 0.86
RNF113AO15541 AC096734.2-201ENST00000562054 433 ntBASIC20.44■□□□□ 0.86
RNF113AO15541 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
RNF113AO15541 AC010507.1-201ENST00000633895 436 ntBASIC20.44■□□□□ 0.86
RNF113AO15541 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
RNF113AO15541 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RNF113AO15541 TUBB8P12-201ENST00000308911 1335 ntBASIC20.44■□□□□ 0.86
RNF113AO15541 TUBB7P-202ENST00000428444 1305 ntBASIC20.44■□□□□ 0.86
RNF113AO15541 TUBB8P7-204ENST00000567960 1332 ntBASIC20.44■□□□□ 0.86
RNF113AO15541 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
RNF113AO15541 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
RNF113AO15541 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
RNF113AO15541 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
RNF113AO15541 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
RNF113AO15541 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
RNF113AO15541 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RNF113AO15541 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC20.44■□□□□ 0.86
RNF113AO15541 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
RNF113AO15541 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RNF113AO15541 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RNF113AO15541 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
RNF113AO15541 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
RNF113AO15541 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
RNF113AO15541 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
RNF113AO15541 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC20.43■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms