Protein–RNA interactions for Protein: A4D0S4

LAMB4, Laminin subunit beta-4, humanhuman

Predictions only

Length 1,761 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMB4A4D0S4 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
LAMB4A4D0S4 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
LAMB4A4D0S4 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC21.32■■□□□ 1
LAMB4A4D0S4 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC21.32■■□□□ 1
LAMB4A4D0S4 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC21.32■■□□□ 1
LAMB4A4D0S4 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC21.32■■□□□ 1
LAMB4A4D0S4 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC21.32■■□□□ 1
LAMB4A4D0S4 MRPS18AP1-201ENST00000414458 589 ntBASIC21.32■■□□□ 1
LAMB4A4D0S4 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC21.32■■□□□ 1
LAMB4A4D0S4 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC21.32■■□□□ 1
LAMB4A4D0S4 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC21.32■■□□□ 1
LAMB4A4D0S4 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
LAMB4A4D0S4 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC21.32■■□□□ 1
LAMB4A4D0S4 AC092053.1-201ENST00000605787 1936 ntBASIC21.32■■□□□ 1
LAMB4A4D0S4 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC21.32■■□□□ 1
LAMB4A4D0S4 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
LAMB4A4D0S4 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC21.32■■□□□ 1
LAMB4A4D0S4 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
LAMB4A4D0S4 HLA-DRB6-201ENST00000411500 1235 ntBASIC21.31■■□□□ 1
LAMB4A4D0S4 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC21.31■■□□□ 1
LAMB4A4D0S4 IGHV3-62-201ENST00000520057 340 ntBASIC21.31■■□□□ 1
LAMB4A4D0S4 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC21.31■■□□□ 1
LAMB4A4D0S4 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
LAMB4A4D0S4 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
LAMB4A4D0S4 AC007967.4-201ENST00000614700 386 ntBASIC21.31■■□□□ 1
LAMB4A4D0S4 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC21.31■■□□□ 1
LAMB4A4D0S4 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
LAMB4A4D0S4 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC21.31■■□□□ 1
LAMB4A4D0S4 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC21.31■■□□□ 1
LAMB4A4D0S4 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
LAMB4A4D0S4 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
LAMB4A4D0S4 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
LAMB4A4D0S4 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
LAMB4A4D0S4 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC21.31■■□□□ 1
LAMB4A4D0S4 UGT1A2P-201ENST00000454886 866 ntBASIC21.31■■□□□ 1
LAMB4A4D0S4 KRT18P34-201ENST00000488218 1270 ntBASIC21.31■■□□□ 1
LAMB4A4D0S4 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
LAMB4A4D0S4 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC21.31■■□□□ 1
LAMB4A4D0S4 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC21.31■■□□□ 1
LAMB4A4D0S4 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC21.31■■□□□ 1
LAMB4A4D0S4 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC21.31■■□□□ 1
LAMB4A4D0S4 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC21.3■■□□□ 1
LAMB4A4D0S4 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC21.3■■□□□ 1
LAMB4A4D0S4 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC21.3■■□□□ 1
LAMB4A4D0S4 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC21.3■■□□□ 1
LAMB4A4D0S4 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC21.3■■□□□ 1
LAMB4A4D0S4 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC21.3■■□□□ 1
LAMB4A4D0S4 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC21.3■■□□□ 1
LAMB4A4D0S4 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC21.3■■□□□ 1
LAMB4A4D0S4 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC21.3■■□□□ 1
LAMB4A4D0S4 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
LAMB4A4D0S4 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
LAMB4A4D0S4 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
LAMB4A4D0S4 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
LAMB4A4D0S4 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
LAMB4A4D0S4 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
LAMB4A4D0S4 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC21.29■■□□□ 1
LAMB4A4D0S4 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC21.29■■□□□ 1
LAMB4A4D0S4 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC21.29■■□□□ 1
LAMB4A4D0S4 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
LAMB4A4D0S4 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
LAMB4A4D0S4 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
LAMB4A4D0S4 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC21.29■■□□□ 1
LAMB4A4D0S4 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
LAMB4A4D0S4 PP14571-201ENST00000404327 934 ntTSL 2 BASIC21.29■■□□□ 1
LAMB4A4D0S4 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC21.29■■□□□ 1
LAMB4A4D0S4 AL138918.1-201ENST00000568306 659 ntBASIC21.29■■□□□ 1
LAMB4A4D0S4 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
LAMB4A4D0S4 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC21.29■■□□□ 1
LAMB4A4D0S4 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
LAMB4A4D0S4 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
LAMB4A4D0S4 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
LAMB4A4D0S4 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC21.29■■□□□ 1
LAMB4A4D0S4 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
LAMB4A4D0S4 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
LAMB4A4D0S4 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC21.29■■□□□ 1
LAMB4A4D0S4 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
LAMB4A4D0S4 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
LAMB4A4D0S4 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
LAMB4A4D0S4 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC21.29■■□□□ 1
LAMB4A4D0S4 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
LAMB4A4D0S4 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC21.29■■□□□ 1
LAMB4A4D0S4 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
LAMB4A4D0S4 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
LAMB4A4D0S4 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC21.28■■□□□ 1
LAMB4A4D0S4 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
LAMB4A4D0S4 MIR346-201ENST00000362234 95 ntBASIC21.28■■□□□ 1
LAMB4A4D0S4 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
LAMB4A4D0S4 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
LAMB4A4D0S4 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC21.28■■□□□ 1
LAMB4A4D0S4 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC21.28■■□□□ 1
LAMB4A4D0S4 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC21.28■■□□□ 1
LAMB4A4D0S4 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC21.28■■□□□ 1
LAMB4A4D0S4 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC21.28■■□□□ 1
LAMB4A4D0S4 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC21.28■■□□□ 1
LAMB4A4D0S4 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC21.28■■□□□ 1
LAMB4A4D0S4 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC21.28■■□□□ 1
LAMB4A4D0S4 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC21.28■■□□□ 1
LAMB4A4D0S4 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
LAMB4A4D0S4 AC073439.1-201ENST00000624121 1774 ntBASIC21.28■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms