Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
SSX2IPQ9Y2D8 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC18.43■□□□□ 0.54
SSX2IPQ9Y2D8 NEK7-201ENST00000367383 586 ntTSL 2 BASIC18.43■□□□□ 0.54
SSX2IPQ9Y2D8 NABP1-203ENST00000409510 843 ntTSL 5 BASIC18.43■□□□□ 0.54
SSX2IPQ9Y2D8 PON3-203ENST00000427422 894 ntTSL 3 BASIC18.43■□□□□ 0.54
SSX2IPQ9Y2D8 METTL21AP1-201ENST00000438852 635 ntBASIC18.43■□□□□ 0.54
SSX2IPQ9Y2D8 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.54
SSX2IPQ9Y2D8 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC18.43■□□□□ 0.54
SSX2IPQ9Y2D8 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC18.43■□□□□ 0.54
SSX2IPQ9Y2D8 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC18.43■□□□□ 0.54
SSX2IPQ9Y2D8 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC18.43■□□□□ 0.54
SSX2IPQ9Y2D8 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
SSX2IPQ9Y2D8 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SSX2IPQ9Y2D8 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
SSX2IPQ9Y2D8 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
SSX2IPQ9Y2D8 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SSX2IPQ9Y2D8 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SSX2IPQ9Y2D8 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC18.42■□□□□ 0.54
SSX2IPQ9Y2D8 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
SSX2IPQ9Y2D8 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
SSX2IPQ9Y2D8 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC18.42■□□□□ 0.54
SSX2IPQ9Y2D8 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
SSX2IPQ9Y2D8 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC18.42■□□□□ 0.54
SSX2IPQ9Y2D8 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
SSX2IPQ9Y2D8 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SSX2IPQ9Y2D8 CD276-203ENST00000537340 2439 ntTSL 2 BASIC18.42■□□□□ 0.54
SSX2IPQ9Y2D8 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
SSX2IPQ9Y2D8 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SSX2IPQ9Y2D8 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC18.42■□□□□ 0.54
SSX2IPQ9Y2D8 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SSX2IPQ9Y2D8 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
SSX2IPQ9Y2D8 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SSX2IPQ9Y2D8 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC18.42■□□□□ 0.54
SSX2IPQ9Y2D8 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC18.42■□□□□ 0.54
SSX2IPQ9Y2D8 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SSX2IPQ9Y2D8 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SSX2IPQ9Y2D8 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SSX2IPQ9Y2D8 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
SSX2IPQ9Y2D8 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC18.42■□□□□ 0.54
SSX2IPQ9Y2D8 AL078644.1-201ENST00000609881 752 ntBASIC18.42■□□□□ 0.54
SSX2IPQ9Y2D8 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SSX2IPQ9Y2D8 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC18.42■□□□□ 0.54
SSX2IPQ9Y2D8 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SSX2IPQ9Y2D8 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
SSX2IPQ9Y2D8 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SSX2IPQ9Y2D8 REM2-202ENST00000536884 1331 ntTSL 2 BASIC18.42■□□□□ 0.54
SSX2IPQ9Y2D8 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SSX2IPQ9Y2D8 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC18.42■□□□□ 0.54
SSX2IPQ9Y2D8 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SSX2IPQ9Y2D8 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC18.42■□□□□ 0.54
SSX2IPQ9Y2D8 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
SSX2IPQ9Y2D8 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SSX2IPQ9Y2D8 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
SSX2IPQ9Y2D8 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
SSX2IPQ9Y2D8 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC18.41■□□□□ 0.54
SSX2IPQ9Y2D8 REXO1L9P-201ENST00000604264 2108 ntBASIC18.41■□□□□ 0.54
SSX2IPQ9Y2D8 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC18.41■□□□□ 0.54
SSX2IPQ9Y2D8 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC18.41■□□□□ 0.54
SSX2IPQ9Y2D8 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
SSX2IPQ9Y2D8 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SSX2IPQ9Y2D8 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC18.41■□□□□ 0.54
SSX2IPQ9Y2D8 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC18.41■□□□□ 0.54
SSX2IPQ9Y2D8 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
SSX2IPQ9Y2D8 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC18.41■□□□□ 0.54
SSX2IPQ9Y2D8 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SSX2IPQ9Y2D8 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SSX2IPQ9Y2D8 CXCL1P1-201ENST00000502804 216 ntBASIC18.41■□□□□ 0.54
SSX2IPQ9Y2D8 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC18.41■□□□□ 0.54
SSX2IPQ9Y2D8 OR7E47P-204ENST00000575924 449 ntBASIC18.41■□□□□ 0.54
SSX2IPQ9Y2D8 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC18.41■□□□□ 0.54
SSX2IPQ9Y2D8 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC18.41■□□□□ 0.54
SSX2IPQ9Y2D8 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC18.41■□□□□ 0.54
SSX2IPQ9Y2D8 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC18.41■□□□□ 0.54
SSX2IPQ9Y2D8 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC18.41■□□□□ 0.54
SSX2IPQ9Y2D8 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SSX2IPQ9Y2D8 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SSX2IPQ9Y2D8 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SSX2IPQ9Y2D8 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
SSX2IPQ9Y2D8 AL590787.1-201ENST00000568856 1315 ntBASIC18.41■□□□□ 0.54
SSX2IPQ9Y2D8 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
SSX2IPQ9Y2D8 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC18.41■□□□□ 0.54
SSX2IPQ9Y2D8 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SSX2IPQ9Y2D8 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SSX2IPQ9Y2D8 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC18.41■□□□□ 0.54
SSX2IPQ9Y2D8 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC18.41■□□□□ 0.54
SSX2IPQ9Y2D8 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
SSX2IPQ9Y2D8 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
SSX2IPQ9Y2D8 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
SSX2IPQ9Y2D8 AC025580.3-201ENST00000617932 1424 ntBASIC18.4■□□□□ 0.54
SSX2IPQ9Y2D8 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC18.4■□□□□ 0.54
SSX2IPQ9Y2D8 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SSX2IPQ9Y2D8 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SSX2IPQ9Y2D8 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC18.4■□□□□ 0.54
SSX2IPQ9Y2D8 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC18.4■□□□□ 0.54
SSX2IPQ9Y2D8 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC18.4■□□□□ 0.54
SSX2IPQ9Y2D8 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
SSX2IPQ9Y2D8 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SSX2IPQ9Y2D8 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SSX2IPQ9Y2D8 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
SSX2IPQ9Y2D8 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC18.4■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms