Protein–RNA interactions for Protein: Q9UH73

EBF1, Transcription factor COE1, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1Q9UH73 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
EBF1Q9UH73 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
EBF1Q9UH73 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
EBF1Q9UH73 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
EBF1Q9UH73 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
EBF1Q9UH73 AC008894.3-201ENST00000624324 3103 ntBASIC17.45■□□□□ 0.38
EBF1Q9UH73 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
EBF1Q9UH73 MYCLP1-201ENST00000372451 1075 ntBASIC17.45■□□□□ 0.38
EBF1Q9UH73 AC002558.1-201ENST00000488906 803 ntBASIC17.45■□□□□ 0.38
EBF1Q9UH73 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC17.45■□□□□ 0.38
EBF1Q9UH73 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
EBF1Q9UH73 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC17.45■□□□□ 0.38
EBF1Q9UH73 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC17.45■□□□□ 0.38
EBF1Q9UH73 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC17.45■□□□□ 0.38
EBF1Q9UH73 AC105339.1-204ENST00000636249 355 ntBASIC17.45■□□□□ 0.38
EBF1Q9UH73 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
EBF1Q9UH73 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
EBF1Q9UH73 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
EBF1Q9UH73 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
EBF1Q9UH73 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
EBF1Q9UH73 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
EBF1Q9UH73 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
EBF1Q9UH73 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC17.45■□□□□ 0.38
EBF1Q9UH73 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
EBF1Q9UH73 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC17.45■□□□□ 0.38
EBF1Q9UH73 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
EBF1Q9UH73 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC17.45■□□□□ 0.38
EBF1Q9UH73 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
EBF1Q9UH73 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
EBF1Q9UH73 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
EBF1Q9UH73 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
EBF1Q9UH73 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
EBF1Q9UH73 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
EBF1Q9UH73 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
EBF1Q9UH73 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
EBF1Q9UH73 AL121761.2-201ENST00000598007 1648 ntBASIC17.44■□□□□ 0.38
EBF1Q9UH73 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
EBF1Q9UH73 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
EBF1Q9UH73 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
EBF1Q9UH73 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
EBF1Q9UH73 CALY-203ENST00000368558 825 ntTSL 5 BASIC17.44■□□□□ 0.38
EBF1Q9UH73 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
EBF1Q9UH73 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
EBF1Q9UH73 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
EBF1Q9UH73 HLA-J-203ENST00000494367 1087 ntBASIC17.44■□□□□ 0.38
EBF1Q9UH73 CXCL1P1-201ENST00000502804 216 ntBASIC17.44■□□□□ 0.38
EBF1Q9UH73 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC17.44■□□□□ 0.38
EBF1Q9UH73 AL096865.1-201ENST00000606796 927 ntBASIC17.44■□□□□ 0.38
EBF1Q9UH73 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
EBF1Q9UH73 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC17.44■□□□□ 0.38
EBF1Q9UH73 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
EBF1Q9UH73 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
EBF1Q9UH73 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
EBF1Q9UH73 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC17.44■□□□□ 0.38
EBF1Q9UH73 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
EBF1Q9UH73 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
EBF1Q9UH73 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
EBF1Q9UH73 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC17.44■□□□□ 0.38
EBF1Q9UH73 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
EBF1Q9UH73 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC17.44■□□□□ 0.38
EBF1Q9UH73 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
EBF1Q9UH73 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
EBF1Q9UH73 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
EBF1Q9UH73 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC17.44■□□□□ 0.38
EBF1Q9UH73 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
EBF1Q9UH73 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
EBF1Q9UH73 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC17.43■□□□□ 0.38
EBF1Q9UH73 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
EBF1Q9UH73 GOLGA6L17P-202ENST00000614358 1398 ntBASIC17.43■□□□□ 0.38
EBF1Q9UH73 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
EBF1Q9UH73 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
EBF1Q9UH73 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC17.43■□□□□ 0.38
EBF1Q9UH73 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
EBF1Q9UH73 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
EBF1Q9UH73 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
EBF1Q9UH73 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
EBF1Q9UH73 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
EBF1Q9UH73 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
EBF1Q9UH73 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
EBF1Q9UH73 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC17.43■□□□□ 0.38
EBF1Q9UH73 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC17.43■□□□□ 0.38
EBF1Q9UH73 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC17.43■□□□□ 0.38
EBF1Q9UH73 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC17.43■□□□□ 0.38
EBF1Q9UH73 AC004449.1-201ENST00000564240 433 ntBASIC17.43■□□□□ 0.38
EBF1Q9UH73 LSM12-202ENST00000585388 942 ntTSL 3 BASIC17.43■□□□□ 0.38
EBF1Q9UH73 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC17.43■□□□□ 0.38
EBF1Q9UH73 REXO1L3P-201ENST00000622202 1288 ntBASIC17.43■□□□□ 0.38
EBF1Q9UH73 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC17.43■□□□□ 0.38
EBF1Q9UH73 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
EBF1Q9UH73 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
EBF1Q9UH73 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC17.43■□□□□ 0.38
EBF1Q9UH73 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
EBF1Q9UH73 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
EBF1Q9UH73 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
EBF1Q9UH73 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
EBF1Q9UH73 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
EBF1Q9UH73 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
EBF1Q9UH73 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
EBF1Q9UH73 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC17.43■□□□□ 0.38
EBF1Q9UH73 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms