Protein–RNA interactions for Protein: Q9NP61

ARFGAP3, ADP-ribosylation factor GTPase-activating protein 3, humanhuman

Predictions only

Length 516 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGAP3Q9NP61 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ARFGAP3Q9NP61 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
ARFGAP3Q9NP61 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC18.4■□□□□ 0.54
ARFGAP3Q9NP61 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC18.4■□□□□ 0.54
ARFGAP3Q9NP61 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
ARFGAP3Q9NP61 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC18.39■□□□□ 0.54
ARFGAP3Q9NP61 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.54
ARFGAP3Q9NP61 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
ARFGAP3Q9NP61 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
ARFGAP3Q9NP61 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
ARFGAP3Q9NP61 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC18.39■□□□□ 0.54
ARFGAP3Q9NP61 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ARFGAP3Q9NP61 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ARFGAP3Q9NP61 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC18.39■□□□□ 0.53
ARFGAP3Q9NP61 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ARFGAP3Q9NP61 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ARFGAP3Q9NP61 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ARFGAP3Q9NP61 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
ARFGAP3Q9NP61 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
ARFGAP3Q9NP61 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
ARFGAP3Q9NP61 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
ARFGAP3Q9NP61 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ARFGAP3Q9NP61 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
ARFGAP3Q9NP61 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ARFGAP3Q9NP61 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
ARFGAP3Q9NP61 AP000523.1-201ENST00000398242 1049 ntBASIC18.39■□□□□ 0.53
ARFGAP3Q9NP61 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC18.39■□□□□ 0.53
ARFGAP3Q9NP61 SNX5-210ENST00000481323 562 ntTSL 3 BASIC18.39■□□□□ 0.53
ARFGAP3Q9NP61 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC18.39■□□□□ 0.53
ARFGAP3Q9NP61 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC18.39■□□□□ 0.53
ARFGAP3Q9NP61 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC18.39■□□□□ 0.53
ARFGAP3Q9NP61 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ARFGAP3Q9NP61 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC18.39■□□□□ 0.53
ARFGAP3Q9NP61 NAT14-202ENST00000587400 416 ntTSL 5 BASIC18.39■□□□□ 0.53
ARFGAP3Q9NP61 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC18.39■□□□□ 0.53
ARFGAP3Q9NP61 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
ARFGAP3Q9NP61 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC18.39■□□□□ 0.53
ARFGAP3Q9NP61 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ARFGAP3Q9NP61 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ARFGAP3Q9NP61 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ARFGAP3Q9NP61 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
ARFGAP3Q9NP61 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ARFGAP3Q9NP61 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ARFGAP3Q9NP61 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
ARFGAP3Q9NP61 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ARFGAP3Q9NP61 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ARFGAP3Q9NP61 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ARFGAP3Q9NP61 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
ARFGAP3Q9NP61 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ARFGAP3Q9NP61 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
ARFGAP3Q9NP61 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
ARFGAP3Q9NP61 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
ARFGAP3Q9NP61 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC18.39■□□□□ 0.53
ARFGAP3Q9NP61 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC18.38■□□□□ 0.53
ARFGAP3Q9NP61 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC18.38■□□□□ 0.53
ARFGAP3Q9NP61 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC18.38■□□□□ 0.53
ARFGAP3Q9NP61 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ARFGAP3Q9NP61 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ARFGAP3Q9NP61 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ARFGAP3Q9NP61 LINC02012-201ENST00000608206 1725 ntBASIC18.38■□□□□ 0.53
ARFGAP3Q9NP61 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ARFGAP3Q9NP61 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC18.38■□□□□ 0.53
ARFGAP3Q9NP61 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
ARFGAP3Q9NP61 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
ARFGAP3Q9NP61 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
ARFGAP3Q9NP61 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ARFGAP3Q9NP61 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC18.38■□□□□ 0.53
ARFGAP3Q9NP61 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC18.38■□□□□ 0.53
ARFGAP3Q9NP61 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ARFGAP3Q9NP61 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ARFGAP3Q9NP61 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC18.38■□□□□ 0.53
ARFGAP3Q9NP61 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
ARFGAP3Q9NP61 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC18.38■□□□□ 0.53
ARFGAP3Q9NP61 SPDYE15P-201ENST00000424157 909 ntBASIC18.38■□□□□ 0.53
ARFGAP3Q9NP61 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
ARFGAP3Q9NP61 GRAMD4P1-201ENST00000435181 1110 ntBASIC18.38■□□□□ 0.53
ARFGAP3Q9NP61 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC18.38■□□□□ 0.53
ARFGAP3Q9NP61 CD81-212ENST00000526072 1172 ntTSL 5 BASIC18.38■□□□□ 0.53
ARFGAP3Q9NP61 NME3-204ENST00000563498 920 ntTSL 2 BASIC18.38■□□□□ 0.53
ARFGAP3Q9NP61 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC18.38■□□□□ 0.53
ARFGAP3Q9NP61 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
ARFGAP3Q9NP61 AL031432.5-201ENST00000641059 760 ntBASIC18.38■□□□□ 0.53
ARFGAP3Q9NP61 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ARFGAP3Q9NP61 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ARFGAP3Q9NP61 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC18.38■□□□□ 0.53
ARFGAP3Q9NP61 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
ARFGAP3Q9NP61 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ARFGAP3Q9NP61 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ARFGAP3Q9NP61 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ARFGAP3Q9NP61 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
ARFGAP3Q9NP61 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
ARFGAP3Q9NP61 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ARFGAP3Q9NP61 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC18.38■□□□□ 0.53
ARFGAP3Q9NP61 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ARFGAP3Q9NP61 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC18.38■□□□□ 0.53
ARFGAP3Q9NP61 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC18.38■□□□□ 0.53
ARFGAP3Q9NP61 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ARFGAP3Q9NP61 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC18.38■□□□□ 0.53
ARFGAP3Q9NP61 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC18.37■□□□□ 0.53
ARFGAP3Q9NP61 AL136379.1-201ENST00000623471 2642 ntBASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms