Protein–RNA interactions for Protein: Q96DI7

SNRNP40, U5 small nuclear ribonucleoprotein 40 kDa protein, humanhuman

Known RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40Q96DI7 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC15.35■□□□□ 0.05
SNRNP40Q96DI7 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
SNRNP40Q96DI7 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SNRNP40Q96DI7 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SNRNP40Q96DI7 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
SNRNP40Q96DI7 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SNRNP40Q96DI7 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SNRNP40Q96DI7 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
SNRNP40Q96DI7 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SNRNP40Q96DI7 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC15.34■□□□□ 0.05
SNRNP40Q96DI7 AL138781.2-201ENST00000617896 1843 ntBASIC15.34■□□□□ 0.05
SNRNP40Q96DI7 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC15.34■□□□□ 0.05
SNRNP40Q96DI7 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
SNRNP40Q96DI7 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SNRNP40Q96DI7 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SNRNP40Q96DI7 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC15.34■□□□□ 0.05
SNRNP40Q96DI7 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC15.34■□□□□ 0.05
SNRNP40Q96DI7 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC15.34■□□□□ 0.05
SNRNP40Q96DI7 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
SNRNP40Q96DI7 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
SNRNP40Q96DI7 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
SNRNP40Q96DI7 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
SNRNP40Q96DI7 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SNRNP40Q96DI7 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC15.34■□□□□ 0.05
SNRNP40Q96DI7 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
SNRNP40Q96DI7 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
SNRNP40Q96DI7 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC15.34■□□□□ 0.05
SNRNP40Q96DI7 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
SNRNP40Q96DI7 CCDC74BP1-201ENST00000508880 1123 ntBASIC15.34■□□□□ 0.05
SNRNP40Q96DI7 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC15.34■□□□□ 0.05
SNRNP40Q96DI7 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC15.34■□□□□ 0.05
SNRNP40Q96DI7 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SNRNP40Q96DI7 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC15.34■□□□□ 0.05
SNRNP40Q96DI7 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
SNRNP40Q96DI7 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SNRNP40Q96DI7 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
SNRNP40Q96DI7 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC15.34■□□□□ 0.05
SNRNP40Q96DI7 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
SNRNP40Q96DI7 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
SNRNP40Q96DI7 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SNRNP40Q96DI7 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC15.34■□□□□ 0.05
SNRNP40Q96DI7 AC009113.1-201ENST00000570267 2443 ntBASIC15.34■□□□□ 0.05
SNRNP40Q96DI7 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
SNRNP40Q96DI7 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC15.33■□□□□ 0.05
SNRNP40Q96DI7 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
SNRNP40Q96DI7 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
SNRNP40Q96DI7 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.05
SNRNP40Q96DI7 AC012569.1-201ENST00000591191 1524 ntBASIC15.33■□□□□ 0.05
SNRNP40Q96DI7 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
SNRNP40Q96DI7 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC15.33■□□□□ 0.05
SNRNP40Q96DI7 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC15.33■□□□□ 0.05
SNRNP40Q96DI7 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
SNRNP40Q96DI7 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC15.33■□□□□ 0.04
SNRNP40Q96DI7 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SNRNP40Q96DI7 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SNRNP40Q96DI7 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SNRNP40Q96DI7 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SNRNP40Q96DI7 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SNRNP40Q96DI7 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC15.33■□□□□ 0.04
SNRNP40Q96DI7 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC15.33■□□□□ 0.04
SNRNP40Q96DI7 HNRNPRP1-201ENST00000453465 1695 ntBASIC15.33■□□□□ 0.04
SNRNP40Q96DI7 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SNRNP40Q96DI7 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SNRNP40Q96DI7 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
SNRNP40Q96DI7 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC15.33■□□□□ 0.04
SNRNP40Q96DI7 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
SNRNP40Q96DI7 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC15.33■□□□□ 0.04
SNRNP40Q96DI7 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC15.33■□□□□ 0.04
SNRNP40Q96DI7 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
SNRNP40Q96DI7 GAPDHP21-201ENST00000450301 1010 ntBASIC15.33■□□□□ 0.04
SNRNP40Q96DI7 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC15.33■□□□□ 0.04
SNRNP40Q96DI7 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC15.33■□□□□ 0.04
SNRNP40Q96DI7 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SNRNP40Q96DI7 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.04
SNRNP40Q96DI7 AC005412.3-201ENST00000580309 715 ntBASIC15.33■□□□□ 0.04
SNRNP40Q96DI7 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC15.33■□□□□ 0.04
SNRNP40Q96DI7 AL158211.3-201ENST00000607385 239 ntBASIC15.33■□□□□ 0.04
SNRNP40Q96DI7 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC15.33■□□□□ 0.04
SNRNP40Q96DI7 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SNRNP40Q96DI7 HFE2-206ENST00000634927 506 ntTSL 4 BASIC15.33■□□□□ 0.04
SNRNP40Q96DI7 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SNRNP40Q96DI7 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC15.33■□□□□ 0.04
SNRNP40Q96DI7 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SNRNP40Q96DI7 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC15.33■□□□□ 0.04
SNRNP40Q96DI7 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SNRNP40Q96DI7 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
SNRNP40Q96DI7 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SNRNP40Q96DI7 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SNRNP40Q96DI7 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SNRNP40Q96DI7 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC15.33■□□□□ 0.04
SNRNP40Q96DI7 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SNRNP40Q96DI7 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
SNRNP40Q96DI7 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SNRNP40Q96DI7 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC15.33■□□□□ 0.04
SNRNP40Q96DI7 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC15.33■□□□□ 0.04
SNRNP40Q96DI7 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SNRNP40Q96DI7 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SNRNP40Q96DI7 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SNRNP40Q96DI7 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
SNRNP40Q96DI7 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms