Protein–RNA interactions for Protein: Q86VP3

PACS2, Phosphofurin acidic cluster sorting protein 2, humanhuman

Predictions only

Length 889 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACS2Q86VP3 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
PACS2Q86VP3 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PACS2Q86VP3 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
PACS2Q86VP3 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC17.3■□□□□ 0.36
PACS2Q86VP3 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC17.3■□□□□ 0.36
PACS2Q86VP3 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PACS2Q86VP3 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
PACS2Q86VP3 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PACS2Q86VP3 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PACS2Q86VP3 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PACS2Q86VP3 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC17.29■□□□□ 0.36
PACS2Q86VP3 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PACS2Q86VP3 AC026748.1-201ENST00000624349 3251 ntBASIC17.29■□□□□ 0.36
PACS2Q86VP3 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PACS2Q86VP3 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PACS2Q86VP3 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PACS2Q86VP3 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PACS2Q86VP3 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PACS2Q86VP3 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC17.29■□□□□ 0.36
PACS2Q86VP3 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC17.29■□□□□ 0.36
PACS2Q86VP3 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PACS2Q86VP3 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
PACS2Q86VP3 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PACS2Q86VP3 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PACS2Q86VP3 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PACS2Q86VP3 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PACS2Q86VP3 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC17.29■□□□□ 0.36
PACS2Q86VP3 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC17.29■□□□□ 0.36
PACS2Q86VP3 TERF1P1-201ENST00000311003 1181 ntBASIC17.29■□□□□ 0.36
PACS2Q86VP3 BUB3-202ENST00000368859 667 ntTSL 3 BASIC17.29■□□□□ 0.36
PACS2Q86VP3 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
PACS2Q86VP3 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
PACS2Q86VP3 MTND4LP12-201ENST00000448237 295 ntBASIC17.29■□□□□ 0.36
PACS2Q86VP3 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC17.29■□□□□ 0.36
PACS2Q86VP3 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC17.29■□□□□ 0.36
PACS2Q86VP3 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC17.29■□□□□ 0.36
PACS2Q86VP3 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PACS2Q86VP3 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PACS2Q86VP3 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC17.29■□□□□ 0.36
PACS2Q86VP3 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC17.29■□□□□ 0.36
PACS2Q86VP3 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PACS2Q86VP3 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC17.29■□□□□ 0.36
PACS2Q86VP3 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PACS2Q86VP3 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
PACS2Q86VP3 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC17.29■□□□□ 0.36
PACS2Q86VP3 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC17.29■□□□□ 0.36
PACS2Q86VP3 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PACS2Q86VP3 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
PACS2Q86VP3 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PACS2Q86VP3 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PACS2Q86VP3 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PACS2Q86VP3 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PACS2Q86VP3 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
PACS2Q86VP3 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC17.28■□□□□ 0.36
PACS2Q86VP3 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC17.28■□□□□ 0.36
PACS2Q86VP3 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC17.28■□□□□ 0.36
PACS2Q86VP3 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC17.28■□□□□ 0.36
PACS2Q86VP3 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
PACS2Q86VP3 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC17.28■□□□□ 0.36
PACS2Q86VP3 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC17.28■□□□□ 0.36
PACS2Q86VP3 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC17.28■□□□□ 0.36
PACS2Q86VP3 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PACS2Q86VP3 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PACS2Q86VP3 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PACS2Q86VP3 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC17.28■□□□□ 0.36
PACS2Q86VP3 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
PACS2Q86VP3 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC17.28■□□□□ 0.36
PACS2Q86VP3 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
PACS2Q86VP3 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
PACS2Q86VP3 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
PACS2Q86VP3 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
PACS2Q86VP3 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PACS2Q86VP3 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PACS2Q86VP3 RCN1P1-201ENST00000400413 996 ntBASIC17.28■□□□□ 0.36
PACS2Q86VP3 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC17.28■□□□□ 0.36
PACS2Q86VP3 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC17.28■□□□□ 0.36
PACS2Q86VP3 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PACS2Q86VP3 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
PACS2Q86VP3 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC17.28■□□□□ 0.36
PACS2Q86VP3 LINC02281-201ENST00000549013 375 ntTSL 3 BASIC17.28■□□□□ 0.36
PACS2Q86VP3 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC17.28■□□□□ 0.36
PACS2Q86VP3 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
PACS2Q86VP3 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC17.28■□□□□ 0.36
PACS2Q86VP3 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PACS2Q86VP3 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PACS2Q86VP3 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC17.28■□□□□ 0.36
PACS2Q86VP3 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PACS2Q86VP3 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PACS2Q86VP3 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
PACS2Q86VP3 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PACS2Q86VP3 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
PACS2Q86VP3 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PACS2Q86VP3 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
PACS2Q86VP3 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PACS2Q86VP3 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
PACS2Q86VP3 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PACS2Q86VP3 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC17.28■□□□□ 0.36
PACS2Q86VP3 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PACS2Q86VP3 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
PACS2Q86VP3 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms