Protein–RNA interactions for Protein: Q70E73

RAPH1, Ras-associated and pleckstrin homology domains-containing protein 1, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPH1Q70E73 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAPH1Q70E73 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAPH1Q70E73 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAPH1Q70E73 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAPH1Q70E73 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAPH1Q70E73 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
RAPH1Q70E73 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC17.28■□□□□ 0.36
RAPH1Q70E73 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RAPH1Q70E73 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RAPH1Q70E73 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RAPH1Q70E73 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RAPH1Q70E73 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RAPH1Q70E73 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RAPH1Q70E73 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RAPH1Q70E73 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RAPH1Q70E73 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC17.27■□□□□ 0.36
RAPH1Q70E73 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC17.27■□□□□ 0.36
RAPH1Q70E73 AC103564.2-201ENST00000432853 1299 ntBASIC17.27■□□□□ 0.36
RAPH1Q70E73 RN7SL606P-201ENST00000472779 293 ntBASIC17.27■□□□□ 0.36
RAPH1Q70E73 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
RAPH1Q70E73 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC17.27■□□□□ 0.36
RAPH1Q70E73 CD320-202ENST00000537716 1119 ntTSL 2 BASIC17.27■□□□□ 0.36
RAPH1Q70E73 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC17.27■□□□□ 0.36
RAPH1Q70E73 AC090616.6-201ENST00000582640 721 ntBASIC17.27■□□□□ 0.36
RAPH1Q70E73 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC17.27■□□□□ 0.36
RAPH1Q70E73 AC011498.5-201ENST00000592027 486 ntBASIC17.27■□□□□ 0.36
RAPH1Q70E73 VPS72-207ENST00000640458 689 ntTSL 5 BASIC17.27■□□□□ 0.36
RAPH1Q70E73 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RAPH1Q70E73 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
RAPH1Q70E73 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC17.27■□□□□ 0.36
RAPH1Q70E73 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
RAPH1Q70E73 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RAPH1Q70E73 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RAPH1Q70E73 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
RAPH1Q70E73 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RAPH1Q70E73 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
RAPH1Q70E73 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC17.27■□□□□ 0.35
RAPH1Q70E73 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
RAPH1Q70E73 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
RAPH1Q70E73 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RAPH1Q70E73 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
RAPH1Q70E73 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RAPH1Q70E73 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RAPH1Q70E73 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RAPH1Q70E73 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RAPH1Q70E73 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC17.26■□□□□ 0.35
RAPH1Q70E73 AC079328.2-201ENST00000561241 3354 ntBASIC17.26■□□□□ 0.35
RAPH1Q70E73 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RAPH1Q70E73 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
RAPH1Q70E73 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
RAPH1Q70E73 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC17.26■□□□□ 0.35
RAPH1Q70E73 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RAPH1Q70E73 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC17.26■□□□□ 0.35
RAPH1Q70E73 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RAPH1Q70E73 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
RAPH1Q70E73 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
RAPH1Q70E73 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC17.26■□□□□ 0.35
RAPH1Q70E73 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RAPH1Q70E73 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
RAPH1Q70E73 SLC25A1P3-201ENST00000395415 828 ntBASIC17.26■□□□□ 0.35
RAPH1Q70E73 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC17.26■□□□□ 0.35
RAPH1Q70E73 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC17.26■□□□□ 0.35
RAPH1Q70E73 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RAPH1Q70E73 DUX4L26-201ENST00000489078 1255 ntBASIC17.26■□□□□ 0.35
RAPH1Q70E73 AC122714.2-201ENST00000502787 707 ntBASIC17.26■□□□□ 0.35
RAPH1Q70E73 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC17.26■□□□□ 0.35
RAPH1Q70E73 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
RAPH1Q70E73 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC17.26■□□□□ 0.35
RAPH1Q70E73 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC17.26■□□□□ 0.35
RAPH1Q70E73 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RAPH1Q70E73 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RAPH1Q70E73 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
RAPH1Q70E73 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RAPH1Q70E73 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RAPH1Q70E73 FLJ38576-201ENST00000623820 2459 ntBASIC17.26■□□□□ 0.35
RAPH1Q70E73 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RAPH1Q70E73 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC17.26■□□□□ 0.35
RAPH1Q70E73 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RAPH1Q70E73 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RAPH1Q70E73 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RAPH1Q70E73 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC17.26■□□□□ 0.35
RAPH1Q70E73 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
RAPH1Q70E73 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
RAPH1Q70E73 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RAPH1Q70E73 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
RAPH1Q70E73 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC17.25■□□□□ 0.35
RAPH1Q70E73 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RAPH1Q70E73 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC17.25■□□□□ 0.35
RAPH1Q70E73 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RAPH1Q70E73 MED25-212ENST00000618715 1467 ntTSL 5 BASIC17.25■□□□□ 0.35
RAPH1Q70E73 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
RAPH1Q70E73 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RAPH1Q70E73 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RAPH1Q70E73 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC17.25■□□□□ 0.35
RAPH1Q70E73 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RAPH1Q70E73 CES3-203ENST00000543856 3178 ntTSL 2 BASIC17.25■□□□□ 0.35
RAPH1Q70E73 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RAPH1Q70E73 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC17.25■□□□□ 0.35
RAPH1Q70E73 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
RAPH1Q70E73 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms