Protein–RNA interactions for Protein: P62306

SNRPF, Small nuclear ribonucleoprotein F, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPFP62306 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SNRPFP62306 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SNRPFP62306 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SNRPFP62306 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC18.58■□□□□ 0.56
SNRPFP62306 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SNRPFP62306 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC18.58■□□□□ 0.56
SNRPFP62306 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SNRPFP62306 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SNRPFP62306 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC18.57■□□□□ 0.56
SNRPFP62306 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
SNRPFP62306 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
SNRPFP62306 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SNRPFP62306 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SNRPFP62306 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SNRPFP62306 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
SNRPFP62306 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SNRPFP62306 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SNRPFP62306 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
SNRPFP62306 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SNRPFP62306 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SNRPFP62306 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC18.57■□□□□ 0.56
SNRPFP62306 METTL26-205ENST00000397666 726 ntTSL 2 BASIC18.57■□□□□ 0.56
SNRPFP62306 MRPL20P1-201ENST00000400819 433 ntBASIC18.57■□□□□ 0.56
SNRPFP62306 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
SNRPFP62306 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC18.57■□□□□ 0.56
SNRPFP62306 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
SNRPFP62306 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC18.57■□□□□ 0.56
SNRPFP62306 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SNRPFP62306 CBFB-203ENST00000561924 584 ntTSL 5 BASIC18.57■□□□□ 0.56
SNRPFP62306 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
SNRPFP62306 AL049840.3-201ENST00000602669 611 ntBASIC18.57■□□□□ 0.56
SNRPFP62306 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
SNRPFP62306 AC117500.6-201ENST00000624871 588 ntBASIC18.57■□□□□ 0.56
SNRPFP62306 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC18.57■□□□□ 0.56
SNRPFP62306 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC18.57■□□□□ 0.56
SNRPFP62306 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SNRPFP62306 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
SNRPFP62306 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SNRPFP62306 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
SNRPFP62306 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SNRPFP62306 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SNRPFP62306 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SNRPFP62306 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
SNRPFP62306 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC18.56■□□□□ 0.56
SNRPFP62306 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC18.56■□□□□ 0.56
SNRPFP62306 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC18.56■□□□□ 0.56
SNRPFP62306 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
SNRPFP62306 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SNRPFP62306 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC18.56■□□□□ 0.56
SNRPFP62306 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC18.56■□□□□ 0.56
SNRPFP62306 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC18.56■□□□□ 0.56
SNRPFP62306 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
SNRPFP62306 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC18.56■□□□□ 0.56
SNRPFP62306 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
SNRPFP62306 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC18.56■□□□□ 0.56
SNRPFP62306 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SNRPFP62306 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SNRPFP62306 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SNRPFP62306 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SNRPFP62306 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC18.56■□□□□ 0.56
SNRPFP62306 FDX1P1-201ENST00000449115 551 ntBASIC18.56■□□□□ 0.56
SNRPFP62306 AC092910.1-201ENST00000482027 1129 ntBASIC18.56■□□□□ 0.56
SNRPFP62306 IGHV3-22-201ENST00000520721 359 ntBASIC18.56■□□□□ 0.56
SNRPFP62306 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
SNRPFP62306 CD63-204ENST00000546939 779 ntTSL 3 BASIC18.56■□□□□ 0.56
SNRPFP62306 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC18.56■□□□□ 0.56
SNRPFP62306 AC091167.2-201ENST00000579581 588 ntBASIC18.56■□□□□ 0.56
SNRPFP62306 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SNRPFP62306 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC18.56■□□□□ 0.56
SNRPFP62306 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC18.56■□□□□ 0.56
SNRPFP62306 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC18.56■□□□□ 0.56
SNRPFP62306 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC18.56■□□□□ 0.56
SNRPFP62306 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
SNRPFP62306 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SNRPFP62306 AC022211.2-201ENST00000585075 2527 ntBASIC18.56■□□□□ 0.56
SNRPFP62306 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SNRPFP62306 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SNRPFP62306 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SNRPFP62306 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SNRPFP62306 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SNRPFP62306 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
SNRPFP62306 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC18.55■□□□□ 0.56
SNRPFP62306 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SNRPFP62306 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SNRPFP62306 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
SNRPFP62306 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
SNRPFP62306 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SNRPFP62306 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
SNRPFP62306 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC18.55■□□□□ 0.56
SNRPFP62306 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SNRPFP62306 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SNRPFP62306 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SNRPFP62306 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
SNRPFP62306 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC18.55■□□□□ 0.56
SNRPFP62306 AC098831.1-202ENST00000438821 336 ntBASIC18.55■□□□□ 0.56
SNRPFP62306 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SNRPFP62306 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC18.55■□□□□ 0.56
SNRPFP62306 AC010654.1-201ENST00000615722 808 ntBASIC18.55■□□□□ 0.56
SNRPFP62306 AL139011.1-202ENST00000642063 584 ntBASIC18.55■□□□□ 0.56
SNRPFP62306 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms