Protein–RNA interactions for Protein: P50553

ASCL1, Achaete-scute homolog 1, humanhuman

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ASCL1P50553 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC15.26■□□□□ 0.03
ASCL1P50553 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ASCL1P50553 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC15.26■□□□□ 0.03
ASCL1P50553 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
ASCL1P50553 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC15.26■□□□□ 0.03
ASCL1P50553 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
ASCL1P50553 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ASCL1P50553 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC15.26■□□□□ 0.03
ASCL1P50553 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ASCL1P50553 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ASCL1P50553 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
ASCL1P50553 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC15.26■□□□□ 0.03
ASCL1P50553 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC15.26■□□□□ 0.03
ASCL1P50553 AC254562.1-201ENST00000417586 456 ntBASIC15.26■□□□□ 0.03
ASCL1P50553 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC15.26■□□□□ 0.03
ASCL1P50553 CFL1-202ENST00000524553 860 ntTSL 2 BASIC15.26■□□□□ 0.03
ASCL1P50553 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
ASCL1P50553 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC15.26■□□□□ 0.03
ASCL1P50553 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
ASCL1P50553 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC15.26■□□□□ 0.03
ASCL1P50553 AL513190.1-201ENST00000621254 727 ntBASIC15.26■□□□□ 0.03
ASCL1P50553 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
ASCL1P50553 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC15.26■□□□□ 0.03
ASCL1P50553 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC15.26■□□□□ 0.03
ASCL1P50553 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
ASCL1P50553 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ASCL1P50553 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
ASCL1P50553 HARS-201ENST00000307633 1780 ntTSL 2 BASIC15.26■□□□□ 0.03
ASCL1P50553 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
ASCL1P50553 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ASCL1P50553 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
ASCL1P50553 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ASCL1P50553 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC15.26■□□□□ 0.03
ASCL1P50553 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
ASCL1P50553 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
ASCL1P50553 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC15.25■□□□□ 0.03
ASCL1P50553 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ASCL1P50553 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
ASCL1P50553 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC15.25■□□□□ 0.03
ASCL1P50553 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC15.25■□□□□ 0.03
ASCL1P50553 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ASCL1P50553 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
ASCL1P50553 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ASCL1P50553 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC15.25■□□□□ 0.03
ASCL1P50553 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ASCL1P50553 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
ASCL1P50553 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC15.25■□□□□ 0.03
ASCL1P50553 HTR5BP-201ENST00000430851 1154 ntBASIC15.25■□□□□ 0.03
ASCL1P50553 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC15.25■□□□□ 0.03
ASCL1P50553 AC096734.2-201ENST00000562054 433 ntBASIC15.25■□□□□ 0.03
ASCL1P50553 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC15.25■□□□□ 0.03
ASCL1P50553 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC15.25■□□□□ 0.03
ASCL1P50553 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC15.25■□□□□ 0.03
ASCL1P50553 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC15.25■□□□□ 0.03
ASCL1P50553 AC010507.1-201ENST00000633895 436 ntBASIC15.25■□□□□ 0.03
ASCL1P50553 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
ASCL1P50553 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ASCL1P50553 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
ASCL1P50553 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ASCL1P50553 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC15.25■□□□□ 0.03
ASCL1P50553 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ASCL1P50553 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
ASCL1P50553 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
ASCL1P50553 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC15.25■□□□□ 0.03
ASCL1P50553 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ASCL1P50553 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ASCL1P50553 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
ASCL1P50553 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
ASCL1P50553 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
ASCL1P50553 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
ASCL1P50553 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
ASCL1P50553 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC15.25■□□□□ 0.03
ASCL1P50553 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC15.25■□□□□ 0.03
ASCL1P50553 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
ASCL1P50553 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC15.24■□□□□ 0.03
ASCL1P50553 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
ASCL1P50553 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
ASCL1P50553 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ASCL1P50553 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ASCL1P50553 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
ASCL1P50553 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ASCL1P50553 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
ASCL1P50553 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
ASCL1P50553 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ASCL1P50553 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
ASCL1P50553 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC15.24■□□□□ 0.03
ASCL1P50553 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
ASCL1P50553 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
ASCL1P50553 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
ASCL1P50553 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ASCL1P50553 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
ASCL1P50553 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
ASCL1P50553 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC15.24■□□□□ 0.03
ASCL1P50553 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ASCL1P50553 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
ASCL1P50553 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
ASCL1P50553 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
ASCL1P50553 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ASCL1P50553 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ASCL1P50553 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms