Protein–RNA interactions for Protein: O75489

NDUFS3, NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3O75489 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NDUFS3O75489 AL356309.3-201ENST00000624132 1934 ntBASIC17.11■□□□□ 0.33
NDUFS3O75489 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC17.11■□□□□ 0.33
NDUFS3O75489 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
NDUFS3O75489 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
NDUFS3O75489 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NDUFS3O75489 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
NDUFS3O75489 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC17.11■□□□□ 0.33
NDUFS3O75489 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
NDUFS3O75489 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NDUFS3O75489 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
NDUFS3O75489 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NDUFS3O75489 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NDUFS3O75489 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC17.1■□□□□ 0.33
NDUFS3O75489 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NDUFS3O75489 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
NDUFS3O75489 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
NDUFS3O75489 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
NDUFS3O75489 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
NDUFS3O75489 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NDUFS3O75489 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NDUFS3O75489 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NDUFS3O75489 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
NDUFS3O75489 NF2-208ENST00000403435 2568 ntTSL 5 BASIC17.1■□□□□ 0.33
NDUFS3O75489 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NDUFS3O75489 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
NDUFS3O75489 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
NDUFS3O75489 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NDUFS3O75489 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NDUFS3O75489 LINC00982-205ENST00000420957 435 ntBASIC17.1■□□□□ 0.33
NDUFS3O75489 PRYP5-201ENST00000451909 266 ntBASIC17.1■□□□□ 0.33
NDUFS3O75489 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC17.1■□□□□ 0.33
NDUFS3O75489 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NDUFS3O75489 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NDUFS3O75489 NKAPP1-205ENST00000585790 367 ntBASIC17.1■□□□□ 0.33
NDUFS3O75489 CLEC4GP1-201ENST00000596555 870 ntBASIC17.1■□□□□ 0.33
NDUFS3O75489 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC17.1■□□□□ 0.33
NDUFS3O75489 AL139288.1-201ENST00000623748 933 ntBASIC17.1■□□□□ 0.33
NDUFS3O75489 AL022326.1-202ENST00000641533 845 ntBASIC17.1■□□□□ 0.33
NDUFS3O75489 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC17.1■□□□□ 0.33
NDUFS3O75489 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
NDUFS3O75489 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NDUFS3O75489 GID4-202ENST00000376345 1391 ntTSL 3 BASIC17.1■□□□□ 0.33
NDUFS3O75489 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC17.1■□□□□ 0.33
NDUFS3O75489 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NDUFS3O75489 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NDUFS3O75489 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
NDUFS3O75489 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC17.1■□□□□ 0.33
NDUFS3O75489 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC17.1■□□□□ 0.33
NDUFS3O75489 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
NDUFS3O75489 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
NDUFS3O75489 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NDUFS3O75489 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
NDUFS3O75489 OVCH1-AS1-204ENST00000641955 5529 ntBASIC17.1■□□□□ 0.33
NDUFS3O75489 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
NDUFS3O75489 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
NDUFS3O75489 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
NDUFS3O75489 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NDUFS3O75489 STK24-203ENST00000397517 4578 ntTSL 2 BASIC17.09■□□□□ 0.33
NDUFS3O75489 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
NDUFS3O75489 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NDUFS3O75489 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
NDUFS3O75489 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC17.09■□□□□ 0.33
NDUFS3O75489 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC17.09■□□□□ 0.33
NDUFS3O75489 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
NDUFS3O75489 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
NDUFS3O75489 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
NDUFS3O75489 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC17.09■□□□□ 0.33
NDUFS3O75489 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
NDUFS3O75489 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
NDUFS3O75489 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
NDUFS3O75489 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
NDUFS3O75489 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
NDUFS3O75489 KRT18P56-201ENST00000507275 550 ntBASIC17.09■□□□□ 0.33
NDUFS3O75489 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
NDUFS3O75489 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
NDUFS3O75489 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC17.09■□□□□ 0.33
NDUFS3O75489 AC008608.2-201ENST00000606089 416 ntBASIC17.09■□□□□ 0.33
NDUFS3O75489 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
NDUFS3O75489 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC17.09■□□□□ 0.33
NDUFS3O75489 STX3-203ENST00000529177 1571 ntTSL 2 BASIC17.09■□□□□ 0.33
NDUFS3O75489 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
NDUFS3O75489 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
NDUFS3O75489 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC17.09■□□□□ 0.33
NDUFS3O75489 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NDUFS3O75489 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NDUFS3O75489 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
NDUFS3O75489 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
NDUFS3O75489 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
NDUFS3O75489 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NDUFS3O75489 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NDUFS3O75489 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
NDUFS3O75489 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC17.08■□□□□ 0.33
NDUFS3O75489 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
NDUFS3O75489 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
NDUFS3O75489 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
NDUFS3O75489 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
NDUFS3O75489 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.33
NDUFS3O75489 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
NDUFS3O75489 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms