Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
LRCH1Q9Y2L9 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC16.37■□□□□ 0.21
LRCH1Q9Y2L9 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC16.37■□□□□ 0.21
LRCH1Q9Y2L9 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC16.37■□□□□ 0.21
LRCH1Q9Y2L9 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
LRCH1Q9Y2L9 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
LRCH1Q9Y2L9 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LRCH1Q9Y2L9 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LRCH1Q9Y2L9 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC16.37■□□□□ 0.21
LRCH1Q9Y2L9 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC16.37■□□□□ 0.21
LRCH1Q9Y2L9 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
LRCH1Q9Y2L9 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC16.37■□□□□ 0.21
LRCH1Q9Y2L9 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
LRCH1Q9Y2L9 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC16.37■□□□□ 0.21
LRCH1Q9Y2L9 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
LRCH1Q9Y2L9 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
LRCH1Q9Y2L9 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
LRCH1Q9Y2L9 LINC01311-201ENST00000565162 1445 ntBASIC16.36■□□□□ 0.21
LRCH1Q9Y2L9 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC16.36■□□□□ 0.21
LRCH1Q9Y2L9 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LRCH1Q9Y2L9 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC16.36■□□□□ 0.21
LRCH1Q9Y2L9 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC16.36■□□□□ 0.21
LRCH1Q9Y2L9 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
LRCH1Q9Y2L9 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
LRCH1Q9Y2L9 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
LRCH1Q9Y2L9 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
LRCH1Q9Y2L9 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
LRCH1Q9Y2L9 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC16.36■□□□□ 0.21
LRCH1Q9Y2L9 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LRCH1Q9Y2L9 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LRCH1Q9Y2L9 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LRCH1Q9Y2L9 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LRCH1Q9Y2L9 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
LRCH1Q9Y2L9 SNORA78-201ENST00000459373 127 ntBASIC16.36■□□□□ 0.21
LRCH1Q9Y2L9 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LRCH1Q9Y2L9 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
LRCH1Q9Y2L9 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
LRCH1Q9Y2L9 KRT17P2-201ENST00000300992 1314 ntBASIC16.36■□□□□ 0.21
LRCH1Q9Y2L9 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC16.36■□□□□ 0.21
LRCH1Q9Y2L9 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LRCH1Q9Y2L9 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LRCH1Q9Y2L9 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
LRCH1Q9Y2L9 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LRCH1Q9Y2L9 CICP13-201ENST00000422015 2789 ntBASIC16.36■□□□□ 0.21
LRCH1Q9Y2L9 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC16.36■□□□□ 0.21
LRCH1Q9Y2L9 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
LRCH1Q9Y2L9 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
LRCH1Q9Y2L9 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC16.35■□□□□ 0.21
LRCH1Q9Y2L9 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
LRCH1Q9Y2L9 AL024508.2-201ENST00000607749 1894 ntBASIC16.35■□□□□ 0.21
LRCH1Q9Y2L9 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
LRCH1Q9Y2L9 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
LRCH1Q9Y2L9 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
LRCH1Q9Y2L9 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
LRCH1Q9Y2L9 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC16.35■□□□□ 0.21
LRCH1Q9Y2L9 DDX43P3-201ENST00000441064 443 ntBASIC16.35■□□□□ 0.21
LRCH1Q9Y2L9 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
LRCH1Q9Y2L9 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
LRCH1Q9Y2L9 DHDH-203ENST00000522614 776 ntTSL 5 BASIC16.35■□□□□ 0.21
LRCH1Q9Y2L9 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC16.35■□□□□ 0.21
LRCH1Q9Y2L9 AF186192.3-201ENST00000583427 947 ntBASIC16.35■□□□□ 0.21
LRCH1Q9Y2L9 MIR4785-201ENST00000585005 73 ntBASIC16.35■□□□□ 0.21
LRCH1Q9Y2L9 AL353708.3-201ENST00000610272 989 ntBASIC16.35■□□□□ 0.21
LRCH1Q9Y2L9 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
LRCH1Q9Y2L9 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LRCH1Q9Y2L9 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LRCH1Q9Y2L9 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LRCH1Q9Y2L9 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LRCH1Q9Y2L9 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
LRCH1Q9Y2L9 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC16.35■□□□□ 0.21
LRCH1Q9Y2L9 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC16.35■□□□□ 0.21
LRCH1Q9Y2L9 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LRCH1Q9Y2L9 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
LRCH1Q9Y2L9 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LRCH1Q9Y2L9 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC16.35■□□□□ 0.21
LRCH1Q9Y2L9 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC16.35■□□□□ 0.21
LRCH1Q9Y2L9 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
LRCH1Q9Y2L9 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
LRCH1Q9Y2L9 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC16.35■□□□□ 0.21
LRCH1Q9Y2L9 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
LRCH1Q9Y2L9 AC006538.1-201ENST00000567905 1585 ntBASIC16.34■□□□□ 0.21
LRCH1Q9Y2L9 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
LRCH1Q9Y2L9 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LRCH1Q9Y2L9 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
LRCH1Q9Y2L9 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LRCH1Q9Y2L9 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LRCH1Q9Y2L9 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
LRCH1Q9Y2L9 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC16.34■□□□□ 0.21
LRCH1Q9Y2L9 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC16.34■□□□□ 0.21
LRCH1Q9Y2L9 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
LRCH1Q9Y2L9 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC16.34■□□□□ 0.21
LRCH1Q9Y2L9 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC16.34■□□□□ 0.21
LRCH1Q9Y2L9 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
LRCH1Q9Y2L9 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
LRCH1Q9Y2L9 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
LRCH1Q9Y2L9 AP002982.1-201ENST00000492365 877 ntBASIC16.34■□□□□ 0.21
LRCH1Q9Y2L9 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
LRCH1Q9Y2L9 REXO2-216ENST00000544196 452 ntTSL 3 BASIC16.34■□□□□ 0.21
LRCH1Q9Y2L9 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
LRCH1Q9Y2L9 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 67 ms